RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 GOLGA6L4A6NEF3 574 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 TRABD2BA6NFA1 517 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 LRRC72A6NJI9 287 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 TTC34A8MYJ7 566 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 SART1O43290 800 aaKnown RBP25.78■■□□□ 1.72
TMEM54-205ENST00000475208 SRPRAP08240 638 aaKnown RBP25.78■■□□□ 1.72
TMEM54-205ENST00000475208 CYP4F3Q08477 520 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 SMAD1Q15797 465 aaKnown RBP25.78■■□□□ 1.72
TMEM54-205ENST00000475208 DHRS13Q6UX07 377 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 SCUBE3Q8IX30 993 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 OR2T34Q8NGX1 318 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 OMDQ99983 421 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 EBF2Q9HAK2 575 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 XPO7Q9UIA9 1087 aaKnown RBP25.78■■□□□ 1.72
TMEM54-205ENST00000475208 FZD4Q9ULV1 537 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 CEP83Q9Y592 693 aa25.78■■□□□ 1.72
TMEM54-205ENST00000475208 EDDM13A0A1B0GTR0 161 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 TARSL2A2RTX5 802 aaKnown RBP25.77■■□□□ 1.72
TMEM54-205ENST00000475208 P4HA2O15460 535 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 MOCS3O95396 460 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 CD44P16070 742 aaKnown RBP25.77■■□□□ 1.72
TMEM54-205ENST00000475208 SLC8A1P32418 973 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 PSMD8P48556 350 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 GCNT1Q02742 428 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 CAMK2BQ13554 666 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 PRAMEF14Q5SWL7 426 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 ISM2Q6H9L7 571 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 GATAD2AQ86YP4 633 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 LGI2Q8N0V4 545 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 SKA1Q96BD8 255 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 DHTKD1Q96HY7 919 aaPredicted RBP25.77■■□□□ 1.72
TMEM54-205ENST00000475208 ELF4Q99607 663 aaPredicted RBP25.77■■□□□ 1.72
TMEM54-205ENST00000475208 AASDHPPTQ9NRN7 309 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 ADAMTS1Q9UHI8 967 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 ITIH6Q6UXX5 1313 aa25.77■■□□□ 1.72
TMEM54-205ENST00000475208 GOLGA4Q13439 2230 aaKnown RBP25.77■■□□□ 1.72
TMEM54-205ENST00000475208 APOEP02649 317 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 WNT1P04628 370 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 GPD2P43304 727 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 RPL34P49207 117 aaKnown RBP25.76■■□□□ 1.71
TMEM54-205ENST00000475208 ECT2LQ008S8 904 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 SYPL2Q5VXT5 272 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 RNF219Q5W0B1 726 aaPredicted RBP25.76■■□□□ 1.71
TMEM54-205ENST00000475208 RAP1GAP2Q684P5 730 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 CHSY1Q86X52 802 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 SCUBE2Q9NQ36 999 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 SLCO3A1Q9UIG8 710 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 HOOK1Q9UJC3 728 aaKnown RBP25.76■■□□□ 1.71
TMEM54-205ENST00000475208 GTF3C3Q9Y5Q9 886 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 LOC400499M0QZD8 3231 aa25.76■■□□□ 1.71
TMEM54-205ENST00000475208 CAPN9O14815 690 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 ACADSBP45954 432 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 KCNJ12Q14500 433 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 SOWAHCQ53LP3 525 aaPredicted RBP25.75■■□□□ 1.71
TMEM54-205ENST00000475208 DENND1BQ6P3S1 775 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 APCDD1Q8J025 514 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 AADATQ8N5Z0 425 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 RPL10LQ96L21 214 aaKnown RBP25.75■■□□□ 1.71
TMEM54-205ENST00000475208 KREMEN1Q96MU8 473 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 FAM129BQ96TA1 746 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 TJP2Q9UDY2 1190 aa25.75■■□□□ 1.71
TMEM54-205ENST00000475208 NYNRINQ9P2P1 1898 aaKnown RBP25.74■■□□□ 1.71
TMEM54-205ENST00000475208 TACR2P21452 398 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 CD38P28907 300 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 CCR5P51681 352 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 ADPRHP54922 357 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 ZC3H12AQ5D1E8 599 aaKnown RBP25.74■■□□□ 1.71
TMEM54-205ENST00000475208 KLHL10Q6JEL2 608 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 TTI2Q6NXR4 508 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 SND1Q7KZF4 910 aaKnown RBP eCLIP25.74■■□□□ 1.71
TMEM54-205ENST00000475208 BEND5Q7L4P6 421 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 STK40Q8N2I9 435 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 PDCD7Q8N8D1 485 aaKnown RBP25.74■■□□□ 1.71
TMEM54-205ENST00000475208 TIGD1Q96MW7 591 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 TRIM62Q9BVG3 475 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 MAN1B1Q9UKM7 699 aa25.74■■□□□ 1.71
TMEM54-205ENST00000475208 COL5A1P20908 1838 aaPredicted RBP25.74■■□□□ 1.71
TMEM54-205ENST00000475208 A0A1W2PR77 199 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 C10orf142B7Z368 130 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 WNT9AO14904 365 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 ADH1BP00325 375 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 ITGAVP06756 1048 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 KRT5P13647 590 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 GOT1P17174 413 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 ABCB4P21439 1286 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 PPP1R2P41236 205 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 STK19P49842 368 aaPredicted RBP25.73■■□□□ 1.71
TMEM54-205ENST00000475208 SHBQ15464 509 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 EHBP1Q8NDI1 1231 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 OR14C36Q8NHC7 312 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 PTPRN2Q92932 1015 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 LRIG1Q96JA1 1093 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 BTN2A3PQ96KV6 586 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 GDF3Q9NR23 364 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 CNTN6Q9UQ52 1028 aa25.73■■□□□ 1.71
TMEM54-205ENST00000475208 IGSF10Q6WRI0 2623 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 CBX4O00257 560 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 ENC1O14682 589 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 C5AR1P21730 350 aa25.72■■□□□ 1.71
TMEM54-205ENST00000475208 MZF1P28698 734 aaPredicted RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms