RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TMEM51Q9NW97 253 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 PCDHB9Q9Y5E1 797 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 ITIH6Q6UXX5 1313 aa21.03■□□□□ 0.96
PDLIM4-206ENST00000474421 A0A1B0GVM2 712 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 SPAARA0A1B0GVQ0 90 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 TCAF2A6NFQ2 919 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 SIN3BO75182 1162 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 CLCN1P35523 988 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 MATKP42679 507 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 PITX1P78337 314 aaPredicted RBP21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 SLC6A3Q01959 620 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 ZNF423Q2M1K9 1284 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 OLFML1Q6UWY5 402 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 FAM183BPQ6ZVS7 135 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 SLC26A9Q7LBE3 791 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 SLC47A2Q86VL8 602 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 DHX40Q8IX18 779 aaKnown RBP21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 PRMT1Q99873 361 aaKnown RBP21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 ADAM33Q9BZ11 813 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 PDCL3Q9H2J4 239 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 RRN3Q9NYV6 651 aa21.02■□□□□ 0.96
PDLIM4-206ENST00000474421 KNL1Q8NG31 2342 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 USP24Q9UPU5 2620 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 SYNJ2BP-COX16A0A087WUM0 186 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 DAB1O75553 588 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 GRAP2O75791 330 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 PROS1P07225 676 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 CD27P26842 260 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 NOS2P35228 1153 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 MIIPQ5JXC2 388 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 C9orf64Q5T6V5 341 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 LRSAM1Q6UWE0 723 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 NAXDQ8IW45 347 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 TMEM35BQ8NCS4 154 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 ZNF397Q8NF99 534 aaPredicted RBP21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 SCNM1Q9BWG6 230 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 MTG2Q9H4K7 406 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 GAREM1Q9H706 876 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 FBXL12Q9NXK8 326 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 COX16Q9P0S2 106 aa21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 AJAP1Q9UKB5 411 aaPredicted RBP21.01■□□□□ 0.95
PDLIM4-206ENST00000474421 PES1O00541 588 aaKnown RBP21■□□□□ 0.95
PDLIM4-206ENST00000474421 SH3BP5O60239 455 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 FSBPO95073 299 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 ERBB2P04626 1255 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 CTSOP43234 321 aaPredicted RBP21■□□□□ 0.95
PDLIM4-206ENST00000474421 GRIA4P48058 902 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 PLK1P53350 603 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 RAPGEF1Q13905 1077 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 TRIP6Q15654 476 aaKnown RBP21■□□□□ 0.95
PDLIM4-206ENST00000474421 CST6Q15828 149 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 PTPN20Q4JDL3 420 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 UNQ6494/PRO21346Q6UXR6 183 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 APCDD1Q8J025 514 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 CCAR2Q8N163 923 aaKnown RBP21■□□□□ 0.95
PDLIM4-206ENST00000474421 BIRC7Q96CA5 298 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 RPRD1AQ96P16 312 aaPredicted RBP21■□□□□ 0.95
PDLIM4-206ENST00000474421 FZD4Q9ULV1 537 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 NEUROG3Q9Y4Z2 214 aa21■□□□□ 0.95
PDLIM4-206ENST00000474421 FRYQ5TBA9 3013 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 TTC34A8MYJ7 566 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 PDGFRAP16234 1089 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 EEF1GP26641 437 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 CSNK1EP49674 416 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 NME3Q13232 169 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 AUHQ13825 339 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 KCNJ12Q14500 433 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 DRAP1Q14919 205 aaPredicted RBP20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 HLA-BQ31612 363 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 FBXL22Q6P050 247 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 MMAAQ8IVH4 418 aaKnown RBP20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 OMDQ99983 421 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 TM9SF3Q9HD45 589 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 TM7SF3Q9NS93 570 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 SLCO3A1Q9UIG8 710 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 STAP1Q9ULZ2 295 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 PAXBP1Q9Y5B6 917 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 PCDHGB2Q9Y5G2 931 aa20.99■□□□□ 0.95
PDLIM4-206ENST00000474421 CABIN1Q9Y6J0 2220 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 A0A1B0GVT2 93 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 TMEM8BA6NDV4 472 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 LRRC72A6NJI9 287 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 M0QYT0 321 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 MID1O15344 667 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 KRT37O76014 449 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 ADH1BP00325 375 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 PNMA6AP0CW24 399 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 CYP11B1P15538 503 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 SPINK2P20155 84 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 CDH5P33151 784 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 SCNN1AP37088 669 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 VASPP50552 380 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 ZNF177Q13360 481 aaPredicted RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 ELAVL3Q14576 367 aaKnown RBP20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 HSP90AA4PQ58FG1 418 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 KLHDC7AQ5VTJ3 777 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 KIAA0895LQ68EN5 471 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 DPY19L2P1Q6NXN4 242 aa20.98■□□□□ 0.95
PDLIM4-206ENST00000474421 SND1Q7KZF4 910 aaKnown RBP eCLIP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms