RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CALN1Q9BXU9 219 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 SNX25Q9H3E2 840 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 SMYD3Q9H7B4 428 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF408Q9H9D4 720 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 PSMC3IPQ9P2W1 217 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 MORF4L1Q9UBU8 362 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 FETUBQ9UGM5 382 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 DDX20Q9UHI6 824 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC24A2Q9UI40 661 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 DNPEPQ9ULA0 475 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 UBQLN1Q9UMX0 589 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 R3HDM2Q9Y2K5 976 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 PCDHA11Q9Y5I1 949 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CAPN7Q9Y6W3 813 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 NRCAMQ92823 1304 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 OTOFQ9HC10 1997 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 IQANK1A0A1B0GTG1 560 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 A0A1B0GUA9 196 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 TCRBV5S1A1TA0A578 114 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SHISA3A0PJX4 238 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 FAM47DPA6NHR8 397 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF487B1APH4 448 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RASA4BC9J798 803 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 H7C0C1 242 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 O00370 1275 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 APOL1O14791 398 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RASA4O43374 803 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 TSPAN1O60635 241 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PEX10O60683 326 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 UBOX5O94941 541 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 FSBPO95073 299 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 NPTXRO95502 500 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ZBED1O96006 694 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 VTNP04004 478 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 EDN1P05305 212 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RPLP2P05387 115 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 MMP3P08254 477 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 GSTA1P08263 222 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ZGLP1P0C6A0 271 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 KRT10P13645 584 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PDGFRAP16234 1089 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PECAM1P16284 738 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF16P17020 682 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 DRD4P21917 467 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 TGM2P21980 687 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 KDELR1P24390 212 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ALDH3A1P30838 453 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RFC1P35251 1148 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 CHKAP35790 457 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RAP1GAPP47736 663 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ATP5OP48047 213 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 IFNAR2P48551 515 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 CPT1AP50416 773 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 NDST1P52848 882 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 BCAT1P54687 386 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 CDH6P55285 790 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RNF4P78317 190 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 IFI35P80217 286 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 BASP1P80723 227 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SARNPP82979 210 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 OTUD4Q01804 1114 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PDIA2Q13087 525 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SPARCL1Q14515 664 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RASA2Q15283 850 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 FAM110CQ1W6H9 321 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 GOLGA7BQ2TAP0 167 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC10A6Q3KNW5 377 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SV2CQ496J9 727 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PTPN20Q4JDL3 420 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 LDLRAD1Q5T700 205 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 HHATQ5VTY9 493 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 CDCP2Q5VXM1 449 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 OVOS1Q6IE37 1185 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 TAPT1Q6NXT6 567 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 GPR142Q7Z601 462 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SRRM1Q8IYB3 904 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ZBED8Q8IZ13 594 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ZDHHC14Q8IZN3 488 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC4A11Q8NBS3 891 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PDZD8Q8NEN9 1154 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 OR6B3Q8NGW1 331 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC35B2Q8TB61 432 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ACTL9Q8TC94 416 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 TEKT4Q8WW24 435 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 HSPH1Q92598 858 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 APBB2Q92870 758 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 CPB2Q96IY4 423 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF668Q96K58 619 aaPredicted RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 TNIP3Q96KP6 325 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 C9orf72Q96LT7 481 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 MAGEB18Q96M61 343 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 TINF2Q9BSI4 451 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 ELOVL4Q9GZR5 314 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 IQCGQ9H095 443 aaKnown RBP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 KLC2Q9H0B6 622 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 AP5M1Q9H0R1 490 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 EPB41L4BQ9H329 900 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 RNPEPQ9H4A4 650 aa6.1□□□□□ -1.43
ATPAF1-204ENST00000474020 PDGFCQ9NRA1 345 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms