RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CNTN5O94779 1100 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 ABLIM3O94929 683 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 MX2P20592 715 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 FDFT1P37268 417 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 SEC24CP53992 1094 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 TRIP4Q15650 581 aaPredicted RBP18.47■□□□□ 0.55
VARS2-206ENST00000473916 PKN2Q16513 984 aaKnown RBP18.47■□□□□ 0.55
VARS2-206ENST00000473916 RAP1GAP2Q684P5 730 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 CIR1Q86X95 450 aaPredicted RBP18.47■□□□□ 0.55
VARS2-206ENST00000473916 TMEM199Q8N511 208 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 ZNF461Q8TAF7 563 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 SIGLEC10Q96LC7 697 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 HERC2P3Q9BVR0 1158 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 ACSS3Q9H6R3 686 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 AFF4Q9UHB7 1163 aaKnown RBP18.47■□□□□ 0.55
VARS2-206ENST00000473916 PLXNA4Q9HCM2 1894 aa18.47■□□□□ 0.55
VARS2-206ENST00000473916 GOLGA6L7A0A1B0GV03 622 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 NCAM2O15394 837 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 GJB5O95377 273 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 HMGA1P17096 107 aaKnown RBP18.46■□□□□ 0.55
VARS2-206ENST00000473916 NUMBP49757 651 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 KCNQ1P51787 676 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 PARP6Q2NL67 630 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 ALFQ53S48 1182 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 FOXR1Q6PIV2 292 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 CMTR2Q8IYT2 770 aaKnown RBP18.46■□□□□ 0.55
VARS2-206ENST00000473916 IGSF8Q969P0 613 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 STMN4Q9H169 189 aaPredicted RBP18.46■□□□□ 0.55
VARS2-206ENST00000473916 NOL6Q9H6R4 1146 aaKnown RBP18.46■□□□□ 0.55
VARS2-206ENST00000473916 SPG21Q9NZD8 308 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 ZC3H7BQ9UGR2 993 aaKnown RBP18.46■□□□□ 0.55
VARS2-206ENST00000473916 TTLL3Q9Y4R7 772 aa18.46■□□□□ 0.55
VARS2-206ENST00000473916 ZBBXA8MT70 800 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 FGF10O15520 208 aaPredicted RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 USP12O75317 370 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 JCHAINP01591 159 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 IGLV3-27P01718 113 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 APOEP02649 317 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 LAG3P18627 525 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 PHBP35232 272 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 PSEN1P49768 467 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 GEMIN4P57678 1058 aaKnown RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 MPP2Q14168 576 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 NLRP14Q86W24 1093 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 RTL3Q8N8U3 475 aaKnown RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 ZNF512Q96ME7 567 aaPredicted RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 PAFAH2Q99487 392 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 UBE2OQ9C0C9 1292 aaKnown RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 CATSPERBQ9H7T0 1116 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 PPANQ9NQ55 473 aaKnown RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 CHD7Q9P2D1 2997 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 IGSF9Q9P2J2 1179 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 YIPF1Q9Y548 306 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 MAD1L1Q9Y6D9 718 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 C1QAP02745 245 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 NFKB1P19838 968 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 TUFMP49411 452 aaKnown RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 SESN2P58004 480 aaPredicted RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 KBTBD12Q3ZCT8 623 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 NADSYN1Q6IA69 706 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 UNC5AQ6ZN44 842 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 ATPAF2Q8N5M1 289 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 CNTD1Q8N815 330 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 C1orf74Q96LT6 269 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 FERMT1Q9BQL6 677 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 MLPHQ9BV36 600 aaPredicted RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 MLXIPLQ9NP71 852 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 OLA1Q9NTK5 396 aaKnown RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 UBP1Q9NZI7 540 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 CXXC1Q9P0U4 656 aaPredicted RBP18.45■□□□□ 0.54
VARS2-206ENST00000473916 RSPH14Q9UHP6 348 aa18.45■□□□□ 0.54
VARS2-206ENST00000473916 CPP00450 1065 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 SPATA31D3P0C874 917 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 SLC2A3P11169 496 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 NRG1Q02297 640 aaPredicted RBP18.44■□□□□ 0.54
VARS2-206ENST00000473916 CBLBQ13191 982 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 TEX44Q53QW1 395 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 FBXL22Q6P050 247 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 SPATA31D4Q6ZUB0 917 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 OTOP3Q7RTS5 596 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 DDX53Q86TM3 631 aaKnown RBP18.44■□□□□ 0.54
VARS2-206ENST00000473916 TDRPQ86YL5 185 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 MGARPQ8TDB4 240 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 DCAKDQ8WVC6 231 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 ATXN2LQ8WWM7 1075 aaKnown RBP18.44■□□□□ 0.54
VARS2-206ENST00000473916 BTN2A3PQ96KV6 586 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 FRMD8Q9BZ67 464 aaPredicted RBP18.44■□□□□ 0.54
VARS2-206ENST00000473916 IL23AQ9NPF7 189 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 COMMD8Q9NX08 183 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 OBSL1O75147 1896 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 A0A1W2PPM1 405 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 TMEM120BA0PK00 339 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 ZNF840PA6NDX5 716 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 CXorf49A8MYA2 514 aaPredicted RBP18.44■□□□□ 0.54
VARS2-206ENST00000473916 RASA4BC9J798 803 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 RASA4O43374 803 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 MAFKO60675 156 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 CSPG5O95196 566 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 URODP06132 367 aa18.44■□□□□ 0.54
VARS2-206ENST00000473916 LINC00271P0C7V0 271 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms