RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 RPRD1AQ96P16 312 aaPredicted RBP23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 TBCBQ99426 244 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 WDCPQ9H6R7 721 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 PRSS16Q9NQE7 514 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 TMEM74BQ9NUR3 256 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 ARHGEF38Q9NXL2 777 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 WSB2Q9NYS7 404 aaPredicted RBP23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 TMEM59LQ9UK28 342 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 PILRBQ9UKJ0 227 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 VANGL2Q9ULK5 521 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 PAXBP1Q9Y5B6 917 aa23.27■■□□□ 1.32
PTP4A1-203ENST00000473334 IGLV3-19P01714 112 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 SRPRAP08240 638 aaKnown RBP23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 C7P10643 843 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 MMP8P22894 467 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 OXTRP30559 389 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 TRIM61Q5EBN2 209 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 IL31Q6EBC2 164 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 ARCQ7LC44 396 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 IGSF8Q969P0 613 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 TOE1Q96GM8 510 aaKnown RBP23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 MRGPRX3Q96LB0 322 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 TKTL2Q9H0I9 626 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 ERVW-1Q9UQF0 538 aa23.26■■□□□ 1.31
PTP4A1-203ENST00000473334 ADCY5O95622 1261 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 GGCXP38435 758 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 ZNF165P49910 485 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 OXCT1P55809 520 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 CENPCQ03188 943 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 TRNP1Q6NT89 227 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 APCDD1Q8J025 514 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 SLC30A5Q8TAD4 765 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 FOXJ1Q92949 421 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 ZNF419Q96HQ0 510 aaPredicted RBP23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 FUCA2Q9BTY2 467 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 NUSAP1Q9BXS6 441 aaKnown RBP23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 SIK2Q9H0K1 926 aa23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 METTL5Q9NRN9 209 aaKnown RBP23.25■■□□□ 1.31
PTP4A1-203ENST00000473334 NYNRINQ9P2P1 1898 aaKnown RBP23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 UNGP13051 313 aaPredicted RBP23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 PDGFRAP16234 1089 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 CTSOP43234 321 aaPredicted RBP23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 IRX4P78413 519 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 ECT2LQ008S8 904 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 KLHL40Q2TBA0 621 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 HNRNPA1L2Q32P51 320 aaKnown RBP23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 C5orf22Q49AR2 442 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 RNF219Q5W0B1 726 aaPredicted RBP23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 CXorf57Q6NSI4 855 aaKnown RBP23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 SLC23A3Q6PIS1 610 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 C14orf80Q86SX3 495 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 CEP76Q8TAP6 659 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 CFAP57Q96MR6 1250 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 C11orf70Q9BRQ4 267 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 NUP58Q9BVL2 599 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 GPR174Q9BXC1 333 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 RTN4Q9NQC3 1192 aaKnown RBP23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 ANLNQ9NQW6 1124 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 PI4KAP42356 2102 aa23.24■■□□□ 1.31
PTP4A1-203ENST00000473334 GON4LQ3T8J9 2241 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 MED19A0JLT2 244 aaPredicted RBP23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 TEX33O43247 280 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 MZF1P28698 734 aaPredicted RBP23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 NSFP46459 744 aaKnown RBP23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 IRAK1P51617 712 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 ZBTB16Q05516 673 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 ARID5BQ14865 1188 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 DUOXA1Q1HG43 343 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 SYCP2LQ5T4T6 812 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 ZNF776Q68DI1 518 aaPredicted RBP23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 BNIPLQ7Z465 357 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 RABEPKQ7Z6M1 372 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 PCDHB18PQ96TA0 734 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 MTG2Q9H4K7 406 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 ITIH6Q6UXX5 1313 aa23.23■■□□□ 1.31
PTP4A1-203ENST00000473334 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 I6L893 689 aaPredicted RBP23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 CLDN11O75508 207 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 DNTTP04053 509 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 RDXP35241 583 aaKnown RBP23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 PLK1P53350 603 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 CDH4P55283 916 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 GSCP56915 257 aaPredicted RBP23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 RPS14P62263 151 aaKnown RBP23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 SULT2A1Q06520 285 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 ZNF177Q13360 481 aaPredicted RBP23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 CLEC16AQ2KHT3 1053 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 FILIP1LQ4L180 1135 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 ACBD5Q5T8D3 534 aaPredicted RBP23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 RGL4Q8IZJ4 473 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 EMC1Q8N766 993 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 CADM4Q8NFZ8 388 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 PPP1R9BQ96SB3 815 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 TMEM9BQ9NQ34 198 aa23.22■■□□□ 1.31
PTP4A1-203ENST00000473334 TARSL2A2RTX5 802 aaKnown RBP23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 TM4SF5O14894 197 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 SIN3BO75182 1162 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 CFIP05156 583 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 CCDC172P0C7W6 258 aa23.21■■□□□ 1.31
PTP4A1-203ENST00000473334 FERP16591 822 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms