RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 EVLQ9UI08 416 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 SALL4Q9UJQ4 1053 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 GTF3C4Q9UKN8 822 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.67□□□□□ -1.34
HDAC1-205ENST00000472928 INVSQ9Y283 1065 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 KCNMB2Q9Y691 235 aa6.67□□□□□ -1.34
HDAC1-205ENST00000472928 GRID2IPA4D2P6 1211 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 MTMR11A4FU01 709 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CTAGE9A4FU28 777 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CYSRT1A8MQ03 144 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 UPK3BL1B0FP48 263 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 UPK3BL2E5RIL1 263 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 O00370 1275 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 PALMO75781 387 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 SOAT2O75908 522 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 OAZ2O95190 189 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 FTCDO95954 541 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 F11P03951 625 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 TUBB4AP04350 444 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CYP1A1P04798 512 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 PDGFRBP09619 1106 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 MYBL1P10243 752 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 VDRP11473 427 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 GZMAP12544 262 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 UNGP13051 313 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CCDC130P13994 396 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 ARSAP15289 507 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 ACAT1P24752 427 aaKnown RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 GABRR2P28476 465 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 GBP1P32455 592 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 NOP2P46087 812 aaKnown RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 AARSP49588 968 aaKnown RBP eCLIP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 EPHB3P54753 998 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 PSMC1P62191 440 aaKnown RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 DAB2P98082 770 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CYP4F8P98187 520 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 SCAPQ12770 1279 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 GPR17Q13304 367 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 PLD1Q13393 1074 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 RUNX3Q13761 415 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 DMC1Q14565 340 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 STILQ15468 1287 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 IFI16Q16666 785 aaKnown RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 PPP1R2P3Q6NXS1 205 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 XKR5Q6UX68 686 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 MMS22LQ6ZRQ5 1243 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 SYT13Q7L8C5 426 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 LIMS2Q7Z4I7 341 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 DNAJB7Q7Z6W7 309 aaPredicted RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 UNC93AQ86WB7 457 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 RHOT2Q8IXI1 618 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM86AQ8N2M4 240 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CHCHD4Q8N4Q1 142 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 B3GALNT2Q8NCR0 500 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM35BQ8NCS4 154 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 TRIM58Q8NG06 486 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 RPLP0P6Q8NHW5 317 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CYFIP2Q96F07 1278 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 HEXIM2Q96MH2 286 aaKnown RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 PGLYRP2Q96PD5 576 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 SYT15Q9BQS2 421 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 SLC46A2Q9BY10 475 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 ATXN3LQ9H3M9 355 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 EBF3Q9H4W6 596 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 TASP1Q9H6P5 420 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 GKN1Q9NS71 199 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CTTNBP2NLQ9P2B4 639 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CNOT8Q9UFF9 292 aaKnown RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 TSPAN16Q9UKR8 245 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 CCL26Q9Y258 94 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
HDAC1-205ENST00000472928 NME7Q9Y5B8 376 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 COL6A6A6NMZ7 2263 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 DENND4CQ5VZ89 1909 aa6.66□□□□□ -1.34
HDAC1-205ENST00000472928 MYO18AQ92614 2054 aaKnown RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ANTXRLA6NF34 631 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TMEM110-MUSTN1A8MSY1 372 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 M0QZQ0 153 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 CYP1A2P05177 515 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 CALB1P05937 261 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 EPB42P16452 691 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 DRD1P21728 446 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 PCSK1P29120 753 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ADORA2BP29275 332 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 CDH5P33151 784 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 GNL1P36915 607 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-205ENST00000472928 GALK1P51570 392 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 DGKEP52429 567 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 BCAT1P54687 386 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 SEMA3BQ13214 749 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 PDCLQ13371 301 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 CCDC142Q17RM4 750 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 PTPN20Q4JDL3 420 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 ARHGAP15Q53QZ3 475 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 C2CD6Q53TS8 623 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 TRIM61Q5EBN2 209 aa6.65□□□□□ -1.34
HDAC1-205ENST00000472928 MDH1BQ5I0G3 518 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms