RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 BPIFA3Q9BQP9 254 aa20.06■□□□□ 0.8
COMMD1-208ENST00000472729 RXFP3Q9NSD7 469 aa20.06■□□□□ 0.8
COMMD1-208ENST00000472729 USP36Q9P275 1121 aaKnown RBP20.06■□□□□ 0.8
COMMD1-208ENST00000472729 NOCTQ9UK39 431 aaKnown RBP20.06■□□□□ 0.8
COMMD1-208ENST00000472729 PILRBQ9UKJ0 227 aa20.06■□□□□ 0.8
COMMD1-208ENST00000472729 SLC6A14Q9UN76 642 aa20.06■□□□□ 0.8
COMMD1-208ENST00000472729 ERVW-1Q9UQF0 538 aa20.06■□□□□ 0.8
COMMD1-208ENST00000472729 FRYLO94915 3013 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 C4orf47A7E2U8 309 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 PATE3B3GLJ2 98 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 CLDN11O75508 207 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 PDGFRAP16234 1089 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 DESP17661 470 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 ZNF165P49910 485 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 JAM2P57087 298 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 EIF4EBP2Q13542 120 aaPredicted RBP20.05■□□□□ 0.8
COMMD1-208ENST00000472729 PLEKHG6Q3KR16 790 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 C2CD6Q53TS8 623 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 PPM1JQ5JR12 505 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 ZNF419Q96HQ0 510 aaPredicted RBP20.05■□□□□ 0.8
COMMD1-208ENST00000472729 PRMT1Q99873 361 aaKnown RBP20.05■□□□□ 0.8
COMMD1-208ENST00000472729 PRSS16Q9NQE7 514 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 PIGVQ9NUD9 493 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 TMEM74BQ9NUR3 256 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 WSB2Q9NYS7 404 aaPredicted RBP20.05■□□□□ 0.8
COMMD1-208ENST00000472729 SLC25A13Q9UJS0 675 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 HS3ST4Q9Y661 456 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 WDR87Q6ZQQ6 2873 aa20.05■□□□□ 0.8
COMMD1-208ENST00000472729 ANKRD62A6NC57 917 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 EPHB6O15197 1021 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 SYPP08247 313 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 RDXP35241 583 aaKnown RBP20.04■□□□□ 0.8
COMMD1-208ENST00000472729 MAPK8P45983 427 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 CXCR3P49682 368 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 NCAPHQ15003 741 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 HNRNPA1L2Q32P51 320 aaKnown RBP20.04■□□□□ 0.8
COMMD1-208ENST00000472729 UAP1L1Q3KQV9 507 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 ARL13BQ3SXY8 428 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 CIR1Q86X95 450 aaPredicted RBP20.04■□□□□ 0.8
COMMD1-208ENST00000472729 SLC30A5Q8TAD4 765 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 PGAP3Q96FM1 320 aaPredicted RBP20.04■□□□□ 0.8
COMMD1-208ENST00000472729 TBCBQ99426 244 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 C11orf70Q9BRQ4 267 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 GTPBP2Q9BX10 602 aaKnown RBP20.04■□□□□ 0.8
COMMD1-208ENST00000472729 BTBD1Q9H0C5 482 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 MUC3BQ9H195 1237 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 MIR1-1HGQ9H1L0 117 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 SCML1Q9UN30 329 aa20.04■□□□□ 0.8
COMMD1-208ENST00000472729 EDDM13A0A1B0GTR0 161 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 TARSL2A2RTX5 802 aaKnown RBP20.03■□□□□ 0.8
COMMD1-208ENST00000472729 SERPINC1P01008 464 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 SERPINF2P08697 491 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 ATP1A3P13637 1013 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 MMP8P22894 467 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 SDC4P31431 198 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 CDH4P55283 916 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 FMO1Q01740 532 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 ACCSLQ4AC99 568 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 SLC23A3Q6PIS1 610 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 ARCQ7LC44 396 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 DHX40Q8IX18 779 aaKnown RBP20.03■□□□□ 0.8
COMMD1-208ENST00000472729 HDDC3Q8N4P3 179 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 SNX19Q92543 992 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 LMLNQ96KR4 655 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 CFAP57Q96MR6 1250 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 METTL5Q9NRN9 209 aaKnown RBP20.03■□□□□ 0.8
COMMD1-208ENST00000472729 ARHGEF38Q9NXL2 777 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 ADAM22Q9P0K1 906 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 VPS28Q9UK41 221 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 INTS6Q9UL03 887 aaKnown RBP20.03■□□□□ 0.8
COMMD1-208ENST00000472729 KIAA1549LQ6ZVL6 1849 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 SDK1Q7Z5N4 2213 aa20.03■□□□□ 0.8
COMMD1-208ENST00000472729 SPTBN4Q9H254 2564 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 SRGAP2O75044 1071 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 ADCY5O95622 1261 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 CYP1A1P04798 512 aaPredicted RBP20.02■□□□□ 0.8
COMMD1-208ENST00000472729 CALB1P05937 261 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 FERP16591 822 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 ENGP17813 658 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 FLT3P36888 993 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 KRT83P78385 493 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 ATP11AP98196 1134 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 CENPCQ03188 943 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 PHLDB2Q86SQ0 1253 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 SLC41A1Q8IVJ1 513 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 APCDD1Q8J025 514 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 IGSF8Q969P0 613 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 NT5C3BQ969T7 300 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 RPL10LQ96L21 214 aaKnown RBP20.02■□□□□ 0.8
COMMD1-208ENST00000472729 C1orf74Q96LT6 269 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 OMDQ99983 421 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 SELENOOQ9BVL4 669 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 PCED1AQ9H1Q7 454 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 CD93Q9NPY3 652 aa20.02■□□□□ 0.8
COMMD1-208ENST00000472729 MED19A0JLT2 244 aaPredicted RBP20.01■□□□□ 0.79
COMMD1-208ENST00000472729 TTC34A8MYJ7 566 aa20.01■□□□□ 0.79
COMMD1-208ENST00000472729 SIN3BO75182 1162 aa20.01■□□□□ 0.79
COMMD1-208ENST00000472729 IGLV3-19P01714 112 aa20.01■□□□□ 0.79
COMMD1-208ENST00000472729 RHOCP08134 193 aa20.01■□□□□ 0.79
COMMD1-208ENST00000472729 KRT3P12035 628 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms