RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 ARCQ7LC44 396 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 NET1Q7Z628 596 aaPredicted RBP17.52■□□□□ 0.4
LAMP1-203ENST00000472564 ZNF410Q86VK4 478 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 PCDH20Q8N6Y1 951 aaKnown RBP17.52■□□□□ 0.4
LAMP1-203ENST00000472564 ATG16L2Q8NAA4 619 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 FNDC5Q8NAU1 212 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 OPTNQ96CV9 577 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 POMKQ9H5K3 350 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 PPP1R11O60927 126 aaPredicted RBP17.52■□□□□ 0.4
LAMP1-203ENST00000472564 POMCP01189 267 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 TNFSF9P41273 254 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 HOMEZQ8IX15 550 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 FAM126BQ8IXS8 530 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 TBL1YQ9BQ87 522 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 ADARB2Q9NS39 739 aaKnown RBP17.52■□□□□ 0.4
LAMP1-203ENST00000472564 TNFSF13BQ9Y275 285 aa17.52■□□□□ 0.4
LAMP1-203ENST00000472564 TCRBV9S1A1TA0A576 114 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 TSPAN3O60637 253 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 RECQL4O94761 1208 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 CCT8P50990 548 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 MSLNQ13421 630 aaPredicted RBP17.52■□□□□ 0.39
LAMP1-203ENST00000472564 CAPSQ13938 189 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 ISLR2Q6UXK2 745 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 UNC93AQ86WB7 457 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 CCDC103Q8IW40 242 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 DMAP1Q9NPF5 467 aaPredicted RBP17.52■□□□□ 0.39
LAMP1-203ENST00000472564 FBXO6Q9NRD1 293 aaPredicted RBP17.52■□□□□ 0.39
LAMP1-203ENST00000472564 NKRFO15226 690 aaKnown RBP eCLIP17.52■□□□□ 0.39
LAMP1-203ENST00000472564 DLGAP3O95886 979 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 TBX4P57082 545 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 CLVS1Q8IUQ0 354 aaPredicted RBP17.52■□□□□ 0.39
LAMP1-203ENST00000472564 DLG3Q92796 817 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 MFSD14AQ96MC6 490 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 EBNA1BP2Q99848 306 aaKnown RBP17.52■□□□□ 0.39
LAMP1-203ENST00000472564 TMEM245Q9H330 911 aa17.52■□□□□ 0.39
LAMP1-203ENST00000472564 AGPSO00116 658 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CCNG1P51959 295 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 FRG1Q14331 258 aaKnown RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 MFSD5Q6N075 450 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 LLGL2Q6P1M3 1020 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 LRRC57Q8N9N7 239 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CERKQ8TCT0 537 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 TMEM169Q96HH4 297 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 DPY30Q9C005 99 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 EPS8L2Q9H6S3 715 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 PRDM16Q9HAZ2 1276 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 TRPM5Q9NZQ8 1165 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 SPTLC1O15269 473 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 SYNCRIPO60506 623 aaKnown RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 RNF180Q86T96 592 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 STK32CQ86UX6 486 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 SLC44A2Q8IWA5 706 aaPredicted RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CASP10Q92851 521 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 RNF145Q96MT1 663 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CXCL11O14625 94 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 SHOX2O60902 331 aaPredicted RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 IL5RAQ01344 420 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 LPCAT1Q8NF37 534 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 METTL6Q8TCB7 284 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 ACMSDQ8TDX5 336 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 FIG4Q92562 907 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 PAWRQ96IZ0 340 aaKnown RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 SEMA6AQ9H2E6 1030 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 RNPEPQ9H4A4 650 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 LRRC4CQ9HCJ2 640 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 ENTPD7Q9NQZ7 604 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 R3HDM2Q9Y2K5 976 aaKnown RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 PSMD12O00232 456 aaPredicted RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CKMP06732 381 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 USP17L7P0C7H9 530 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 SNHG28P0DPA3 235 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 OR1E1P30953 314 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 UGCGQ16739 394 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CARNMT1Q8N4J0 409 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 SPATA16Q9BXB7 569 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CDT1Q9H211 546 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 PRDM12Q9H4Q4 367 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 RNF19AQ9NV58 838 aa17.51■□□□□ 0.39
LAMP1-203ENST00000472564 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 RPL26L1Q9UNX3 145 aaKnown RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 MRPL42Q9Y6G3 142 aaKnown RBP17.51■□□□□ 0.39
LAMP1-203ENST00000472564 TMEM191CA6NGB0 347 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 ZMPSTE24O75844 475 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 CELF2O95319 508 aaKnown RBP17.5■□□□□ 0.39
LAMP1-203ENST00000472564 CPSF4O95639 269 aaKnown RBP17.5■□□□□ 0.39
LAMP1-203ENST00000472564 KRT6AP02538 564 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 KRT6BP04259 564 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 MBL2P11226 248 aaPredicted RBP17.5■□□□□ 0.39
LAMP1-203ENST00000472564 KRT6CP48668 564 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 ZNF135P52742 658 aaPredicted RBP17.5■□□□□ 0.39
LAMP1-203ENST00000472564 RTP1P59025 263 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 PWP1Q13610 501 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 ZNF280DQ6N043 979 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 BHLHE22Q8NFJ8 381 aaPredicted RBP17.5■□□□□ 0.39
LAMP1-203ENST00000472564 HSFY1Q96LI6 401 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 PAIP1Q9H074 479 aaKnown RBP17.5■□□□□ 0.39
LAMP1-203ENST00000472564 PCDHA11Q9Y5I1 949 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 DCDC2CA8MYV0 355 aa17.5■□□□□ 0.39
LAMP1-203ENST00000472564 H7C4K7 107 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms