RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ARID5BQ14865 1188 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 TRIP6Q15654 476 aaKnown RBP23.29■■□□□ 1.32
C9orf3-213ENST00000471978 HLA-BQ31612 363 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 SMYD5Q6GMV2 418 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 C11orf57Q6ZUT1 292 aaPredicted RBP23.29■■□□□ 1.32
C9orf3-213ENST00000471978 FAM114A1Q8IWE2 563 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 APCDD1Q8J025 514 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 C1orf131Q8NDD1 294 aaKnown RBP23.29■■□□□ 1.32
C9orf3-213ENST00000471978 BIRC7Q96CA5 298 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 PRMT1Q99873 361 aaKnown RBP23.29■■□□□ 1.32
C9orf3-213ENST00000471978 PABPC3Q9H361 631 aaKnown RBP23.29■■□□□ 1.32
C9orf3-213ENST00000471978 IL21RQ9HBE5 538 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 SLCO1B1Q9Y6L6 691 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 CHD6Q8TD26 2715 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 SPEGQ15772 3267 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 A0A1B0GVT2 93 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 TTC34A8MYJ7 566 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 FOXN3O00409 490 aaPredicted RBP23.28■■□□□ 1.32
C9orf3-213ENST00000471978 TRIM16O95361 564 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 CLCN1P35523 988 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 C9orf64Q5T6V5 341 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 RNF219Q5W0B1 726 aaPredicted RBP23.28■■□□□ 1.32
C9orf3-213ENST00000471978 OR6B2Q6IFH4 312 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 FAM183BPQ6ZVS7 135 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 USP30Q70CQ3 517 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 SLC47A2Q86VL8 602 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 NDST4Q9H3R1 872 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 FBXL12Q9NXK8 326 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 SLCO3A1Q9UIG8 710 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 NEUROG3Q9Y4Z2 214 aa23.28■■□□□ 1.32
C9orf3-213ENST00000471978 EDDM13A0A1B0GTR0 161 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 TARSL2A2RTX5 802 aaKnown RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 PNMA6AP0CW24 399 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 PRKCSHP14314 528 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 SNX16P57768 344 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 SFSWAPQ12872 951 aaKnown RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 TEAD4Q15561 434 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 CST6Q15828 149 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 ZNF423Q2M1K9 1284 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 DPCR1Q3MIW9 517 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 VWA3BQ502W6 1294 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 RABGAP1LQ5R372 815 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 TTC39BQ5VTQ0 682 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 OLFML1Q6UWY5 402 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 CIR1Q86X95 450 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 MMAAQ8IVH4 418 aaKnown RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 CCAR2Q8N163 923 aaKnown RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 RPL10LQ96L21 214 aaKnown RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 TMEM121BQ9BXQ6 578 aaPredicted RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 SYNCQ9H7C4 482 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 TM9SF3Q9HD45 589 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 KLK13Q9UKR3 277 aa23.27■■□□□ 1.32
C9orf3-213ENST00000471978 FNDC3AQ9Y2H6 1198 aaKnown RBP23.27■■□□□ 1.32
C9orf3-213ENST00000471978 MID1O15344 667 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 ERBB2P04626 1255 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 ZNF883P0CG24 379 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 PDGFRAP16234 1089 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 CD27P26842 260 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 NUMBP49757 651 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 SLC12A1Q13621 1099 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 KIF19Q2TAC6 998 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 HSP90AA4PQ58FG1 418 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 SETD7Q8WTS6 366 aaKnown RBP23.26■■□□□ 1.31
C9orf3-213ENST00000471978 GATA6Q92908 595 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 TUBGCP2Q9BSJ2 902 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 OSGEPQ9NPF4 335 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 PLCB1Q9NQ66 1216 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 TM7SF3Q9NS93 570 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 SERGEFQ9UGK8 458 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 ITIH6Q6UXX5 1313 aa23.26■■□□□ 1.31
C9orf3-213ENST00000471978 FAM47DPA6NHR8 397 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 ERCC5P28715 1186 aaPredicted RBP23.25■■□□□ 1.31
C9orf3-213ENST00000471978 BPIFB4P59827 614 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 SLC6A3Q01959 620 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 NME3Q13232 169 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 PTPN20Q4JDL3 420 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 MIIPQ5JXC2 388 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 FBXL22Q6P050 247 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 FAM71AQ8IYT1 594 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 CHCHD4Q8N4Q1 142 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 RPRD1AQ96P16 312 aaPredicted RBP23.25■■□□□ 1.31
C9orf3-213ENST00000471978 DACH1Q9UI36 760 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 ANKRD6Q9Y2G4 727 aa23.25■■□□□ 1.31
C9orf3-213ENST00000471978 A0A1B0GVM2 712 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 A0A1W2PP55 124 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 TCAF2A6NFQ2 919 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 DAB1O75553 588 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 RNASEH2AO75792 299 aaKnown RBP23.24■■□□□ 1.31
C9orf3-213ENST00000471978 IGHV4-34P06331 123 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 MZF1P28698 734 aaPredicted RBP23.24■■□□□ 1.31
C9orf3-213ENST00000471978 SLC8A1P32418 973 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 NNMTP40261 264 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 GRIA4P48058 902 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 STK19P49842 368 aaPredicted RBP23.24■■□□□ 1.31
C9orf3-213ENST00000471978 OXCT1P55809 520 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 SULT2A1Q06520 285 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 MTA1Q13330 715 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 AUHQ13825 339 aaKnown RBP23.24■■□□□ 1.31
C9orf3-213ENST00000471978 RAPGEF1Q13905 1077 aa23.24■■□□□ 1.31
C9orf3-213ENST00000471978 KIAA0895LQ68EN5 471 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms