RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 TRIM56Q9BRZ2 755 aaKnown RBP6.6□□□□□ -1.35
SPEN-204ENST00000471538 VPS11Q9H270 941 aa6.6□□□□□ -1.35
SPEN-204ENST00000471538 C12orf65Q9H3J6 166 aaKnown RBP6.6□□□□□ -1.35
SPEN-204ENST00000471538 RRN3Q9NYV6 651 aa6.6□□□□□ -1.35
SPEN-204ENST00000471538 MOCS1Q9NZB8 636 aa6.6□□□□□ -1.35
SPEN-204ENST00000471538 FBXW11Q9UKB1 542 aa6.6□□□□□ -1.35
SPEN-204ENST00000471538 PADI3Q9ULW8 664 aa6.6□□□□□ -1.35
SPEN-204ENST00000471538 NEU3Q9UQ49 428 aa6.6□□□□□ -1.35
SPEN-204ENST00000471538 TIMM13Q9Y5L4 95 aaPredicted RBP6.6□□□□□ -1.35
SPEN-204ENST00000471538 RAD54BQ9Y620 910 aa6.6□□□□□ -1.35
SPEN-204ENST00000471538 TDRD15B5MCY1 1934 aaKnown RBP6.6□□□□□ -1.35
SPEN-204ENST00000471538 A0A0U1RQF3 1178 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CFAP73A6NFT4 308 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 TRIM49D1C9J1S8 452 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 GOLGA8RI6L899 631 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 TNFRSF10AO00220 468 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 RNF103O00237 685 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 EEF2KO00418 725 aaKnown RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 PPP1R12AO14974 1030 aaPredicted RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 UGT1A9O60656 530 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 LPXNO60711 386 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 ZNF189O75820 626 aaPredicted RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 LTFP02788 710 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 MT-ND3P03897 115 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 ASGR1P07306 291 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 SNRPAP09012 282 aaKnown RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 USP17L7P0C7H9 530 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 ODC1P11926 461 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CCNB1P14635 433 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 ERCC2P18074 760 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 PAX3P23760 479 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 PCSK1P29120 753 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CCND3P30281 292 aaPredicted RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 BMP8BP34820 402 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CXCR3P49682 368 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 ZNF135P52742 658 aaPredicted RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 PPIDQ08752 370 aaKnown RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 GRIK3Q13003 919 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 NME3Q13232 169 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 PDK1Q15118 436 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 KCNA10Q16322 511 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 PARP6Q2NL67 630 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 FAM133BQ5BKY9 247 aaKnown RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 SPDYAQ5MJ70 313 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 HHATQ5VTY9 493 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CYB5D1Q6P9G0 228 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 TIFABQ6ZNK6 161 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CDHR3Q6ZTQ4 885 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 MARK2Q7KZI7 788 aaKnown RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 ASRGL1Q7L266 308 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 KLHDC8BQ8IXV7 354 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 ZNF567Q8N184 647 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 NPWQ8N729 165 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 PPM1NQ8N819 430 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CCDC63Q8NA47 563 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 COLGALT1Q8NBJ5 622 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 NETO2Q8NC67 525 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 OR10T2Q8NGX3 314 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 SLC7A14Q8TBB6 771 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 ZNF398Q8TD17 642 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 RSPH1Q8WYR4 309 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 APBB2Q92870 758 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 MTBPQ96DY7 904 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 PAWRQ96IZ0 340 aaKnown RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 GUCD1Q96NT3 240 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 RHOBTB2Q9BYZ6 727 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 PRDM12Q9H4Q4 367 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 UGT1A7Q9HAW7 530 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 UGT1A10Q9HAW8 530 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 UGT1A8Q9HAW9 530 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 SPC25Q9HBM1 224 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 XPNPEP3Q9NQH7 507 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 TMLHEQ9NVH6 421 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 KLHL14Q9P2G3 628 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 KANSL3Q9P2N6 904 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 GGT7Q9UJ14 662 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 CHKBQ9Y259 395 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 USH1CQ9Y6N9 552 aa6.59□□□□□ -1.35
SPEN-204ENST00000471538 FNDC1Q4ZHG4 1894 aaPredicted RBP6.59□□□□□ -1.35
SPEN-204ENST00000471538 SYNJ2BP-COX16A0A087WUM0 186 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 H0YHG0 523 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 I3L4J1 428 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 KLF11O14901 512 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 CREB3O43889 395 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 MGRN1O60291 552 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 KRT37O76014 449 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 F9P00740 461 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 INHAP05111 366 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 NCAM1P13591 858 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 SYN1P17600 705 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 TYMPP19971 482 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 PTPN3P26045 913 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 PSMB4P28070 264 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.36
SPEN-204ENST00000471538 THPOP40225 353 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 BRCC3P46736 316 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 ELF3P78545 371 aaPredicted RBP6.59□□□□□ -1.36
SPEN-204ENST00000471538 GALNT2Q10471 571 aa6.59□□□□□ -1.36
SPEN-204ENST00000471538 AP1B1Q10567 949 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms