RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 CHD5Q8TDI0 1954 aa13.01□□□□□ -0.33
SND1-209ENST00000470723 CXorf51AA0A1B0GTR3 108 aa13□□□□□ -0.33
SND1-209ENST00000470723 KANSL1LA0AUZ9 987 aa13□□□□□ -0.33
SND1-209ENST00000470723 TYW5A2RUC4 315 aaKnown RBP13□□□□□ -0.33
SND1-209ENST00000470723 C3orf70A6NLC5 250 aaPredicted RBP13□□□□□ -0.33
SND1-209ENST00000470723 FGF10O15520 208 aaPredicted RBP13□□□□□ -0.33
SND1-209ENST00000470723 SPOPO43791 374 aa13□□□□□ -0.33
SND1-209ENST00000470723 CTNNA1P35221 906 aaKnown RBP13□□□□□ -0.33
SND1-209ENST00000470723 GRIA2P42262 883 aa13□□□□□ -0.33
SND1-209ENST00000470723 IRAK1P51617 712 aa13□□□□□ -0.33
SND1-209ENST00000470723 DPYSQ14117 519 aa13□□□□□ -0.33
SND1-209ENST00000470723 DMC1Q14565 340 aa13□□□□□ -0.33
SND1-209ENST00000470723 CXorf57Q6NSI4 855 aaKnown RBP13□□□□□ -0.33
SND1-209ENST00000470723 ZNF783Q6ZMS7 281 aa13□□□□□ -0.33
SND1-209ENST00000470723 MAP7D3Q8IWC1 876 aa13□□□□□ -0.33
SND1-209ENST00000470723 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
SND1-209ENST00000470723 RCOR2Q8IZ40 523 aa13□□□□□ -0.33
SND1-209ENST00000470723 SYNPOQ8N3V7 929 aa13□□□□□ -0.33
SND1-209ENST00000470723 NAT16Q8N8M0 369 aa13□□□□□ -0.33
SND1-209ENST00000470723 KCNV2Q8TDN2 545 aa13□□□□□ -0.33
SND1-209ENST00000470723 RAPGEF5Q92565 580 aa13□□□□□ -0.33
SND1-209ENST00000470723 TTC17Q96AE7 1141 aa13□□□□□ -0.33
SND1-209ENST00000470723 TBC1D31Q96DN5 1066 aa13□□□□□ -0.33
SND1-209ENST00000470723 ALG14Q96F25 216 aa13□□□□□ -0.33
SND1-209ENST00000470723 HES6Q96HZ4 224 aa13□□□□□ -0.33
SND1-209ENST00000470723 KLC2Q9H0B6 622 aa13□□□□□ -0.33
SND1-209ENST00000470723 GOLPH3Q9H4A6 298 aa13□□□□□ -0.33
SND1-209ENST00000470723 LZTFL1Q9NQ48 299 aa13□□□□□ -0.33
SND1-209ENST00000470723 GPATCH2LQ9NWQ4 482 aa13□□□□□ -0.33
SND1-209ENST00000470723 MPP6Q9NZW5 540 aa13□□□□□ -0.33
SND1-209ENST00000470723 KIAA1522Q9P206 1035 aaPredicted RBP13□□□□□ -0.33
SND1-209ENST00000470723 STIM2Q9P246 746 aa13□□□□□ -0.33
SND1-209ENST00000470723 AMFRQ9UKV5 643 aa13□□□□□ -0.33
SND1-209ENST00000470723 MRPS17Q9Y2R5 130 aaKnown RBP13□□□□□ -0.33
SND1-209ENST00000470723 HYOU1Q9Y4L1 999 aa13□□□□□ -0.33
SND1-209ENST00000470723 OR51B4Q9Y5P0 310 aa13□□□□□ -0.33
SND1-209ENST00000470723 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 ILVBLA1L0T0 632 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 CCDC66A2RUB6 948 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 GOLGA6L9A6NEM1 432 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 MIF4GDA9UHW6 222 aaKnown RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 K7EQS6 105 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 EEF2KO00418 725 aaKnown RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 GPR37L1O60883 481 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 KAT7O95251 611 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 CHRM1P11229 460 aaPredicted RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 CHRNB1P11230 501 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 EPHB2P29323 1055 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 HLA-FP30511 346 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 GGCXP38435 758 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 MAPKAPK2P49137 400 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 DGKGP49619 791 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 MESP2Q0VG99 397 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 ZNF177Q13360 481 aaPredicted RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 CCINQ13939 588 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 DPYSL3Q14195 570 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 SMTNL2Q2TAL5 461 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 FSCBQ5H9T9 825 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 AFMIDQ63HM1 303 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 GRAMD4Q6IC98 578 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 FSTL4Q6MZW2 842 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 TPRG1Q6ZUI0 275 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 RFX8Q6ZV50 586 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 ADIPOR2Q86V24 386 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 SIX5Q8N196 739 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 UMODL1-AS1Q8N2C9 162 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 RTL3Q8N8U3 475 aaKnown RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 KCTD6Q8NC69 237 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 TRIM58Q8NG06 486 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 EXD1Q8NHP7 514 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 WFDC5Q8TCV5 224 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 HSPH1Q92598 858 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 CLDN23Q96B33 292 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 CSPG4P5Q96PW8 444 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 FEM1AQ9BSK4 669 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 CATSPERBQ9H7T0 1116 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.99□□□□□ -0.33
SND1-209ENST00000470723 DNAJC17Q9NVM6 304 aaKnown RBP12.99□□□□□ -0.33
SND1-209ENST00000470723 FBXL21Q9UKT6 434 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 CA14Q9ULX7 337 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
SND1-209ENST00000470723 CAPN6Q9Y6Q1 641 aa12.99□□□□□ -0.33
SND1-209ENST00000470723 MIA3Q5JRA6 1907 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 H3BRJ5 948 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 DCLK1O15075 740 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 TRIM24O15164 1050 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 CREB3O43889 395 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 ZRANB2O95218 330 aaKnown RBP eCLIP12.98□□□□□ -0.33
SND1-209ENST00000470723 CD48P09326 243 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 GOT1P17174 413 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 ERCC2P18074 760 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
SND1-209ENST00000470723 CDH6P55285 790 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 YBEYP58557 167 aaPredicted RBP12.98□□□□□ -0.33
SND1-209ENST00000470723 COPS2P61201 443 aa12.98□□□□□ -0.33
SND1-209ENST00000470723 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms