RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 A0A1W2PQF6 199 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 EBAG9O00559 213 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 KRT86O43790 486 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 RALAP11233 206 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 GABRG2P18507 467 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 NTSR1P30989 418 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 DGKGP49619 791 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 KIAA1211LQ6NV74 962 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 Q6ZNB5 142 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
FAM228B-203ENST00000469867 DNAI2Q9GZS0 605 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 NUCKS1Q9H1E3 243 aaKnown RBP12.09□□□□□ -0.47
FAM228B-203ENST00000469867 CACNA2D2Q9NY47 1150 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 MBD1Q9UIS9 605 aaPredicted RBP12.09□□□□□ -0.47
FAM228B-203ENST00000469867 CEP83Q9Y592 693 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 RAD54BQ9Y620 910 aa12.09□□□□□ -0.47
FAM228B-203ENST00000469867 KHNYNO15037 678 aaKnown RBP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 CD19P15391 556 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 PRKCIP41743 596 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 TKTL1P51854 596 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 ACTN3Q08043 901 aaPredicted RBP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 WHAMMP3Q1A5X7 153 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 LPCAT2Q7L5N7 544 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 C11orf74Q86VG3 221 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 FAM76AQ8TAV0 307 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 SYT11Q9BT88 431 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 SLC6A17Q9H1V8 727 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 CLIC5Q9NZA1 410 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 WDR35Q9P2L0 1181 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 DMGDHQ9UI17 866 aaKnown RBP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 TSPAN16Q9UKR8 245 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 CACNA1GO43497 2377 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 ITPKAP23677 461 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 CORO1AP31146 461 aaKnown RBP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 STAT1P42224 750 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 DNA2P51530 1060 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 SLC8A3P57103 927 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 MCCD1P59942 119 aaPredicted RBP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 CUL2Q13617 745 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 TRIM61Q5EBN2 209 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 PSAPL1Q6NUJ1 521 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 SND1Q7KZF4 910 aaKnown RBP eCLIP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 TRMT11Q7Z4G4 463 aaKnown RBP12.08□□□□□ -0.48
FAM228B-203ENST00000469867 SLC47A2Q86VL8 602 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 ANKRD52Q8NB46 1076 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 CAPS2Q9BXY5 557 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 CD93Q9NPY3 652 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 MARCH2Q9P0N8 246 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 STARD13Q9Y3M8 1113 aa12.08□□□□□ -0.48
FAM228B-203ENST00000469867 GIPC1O14908 333 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 SHOX2O60902 331 aaPredicted RBP12.07□□□□□ -0.48
FAM228B-203ENST00000469867 CXCR5P32302 372 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 YWHAGP61981 247 aaKnown RBP eCLIP12.07□□□□□ -0.48
FAM228B-203ENST00000469867 COG7P83436 770 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 RPL6Q02878 288 aaKnown RBP12.07□□□□□ -0.48
FAM228B-203ENST00000469867 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 TTMPQ5BVD1 217 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 N4BP2L1Q5TBK1 243 aaPredicted RBP12.07□□□□□ -0.48
FAM228B-203ENST00000469867 ALKBH5Q6P6C2 394 aaKnown RBP12.07□□□□□ -0.48
FAM228B-203ENST00000469867 CCNI2Q6ZMN8 369 aaPredicted RBP12.07□□□□□ -0.48
FAM228B-203ENST00000469867 TTC39CQ8N584 583 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 UBA3Q8TBC4 463 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 KCNV2Q8TDN2 545 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 MARK1Q9P0L2 795 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 PACSIN2Q9UNF0 486 aaPredicted RBP12.07□□□□□ -0.48
FAM228B-203ENST00000469867 COQ4Q9Y3A0 265 aa12.07□□□□□ -0.48
FAM228B-203ENST00000469867 GOLGA6BA6NDN3 693 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 ZBED1O96006 694 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 KRT14P02533 472 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 NDUFV2P19404 249 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 SEC24CP53992 1094 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 ADIGQ0VDE8 80 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 UAP1L1Q3KQV9 507 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 RAB41Q5JT25 222 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 SDE2Q6IQ49 451 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 FAXDC2Q96IV6 333 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 ULBP1Q9BZM6 244 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 FAM107BQ9H098 131 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 FSCN3Q9NQT6 498 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 SEPT11Q9NVA2 429 aaKnown RBP12.06□□□□□ -0.48
FAM228B-203ENST00000469867 AGO1Q9UL18 857 aaKnown RBP12.06□□□□□ -0.48
FAM228B-203ENST00000469867 NENFQ9UMX5 172 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 SLC12A8A0AV02 714 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 CDX4O14627 284 aaPredicted RBP12.06□□□□□ -0.48
FAM228B-203ENST00000469867 KCNK5O95279 499 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 CISD3P0C7P0 127 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 ABCB4P21439 1286 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 MAPK8P45983 427 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 NOVA1P51513 510 aaKnown RBP12.06□□□□□ -0.48
FAM228B-203ENST00000469867 SGO2Q562F6 1265 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 FYB2Q5VWT5 728 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 ARHGAP17Q68EM7 881 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 NOP9Q86U38 636 aaKnown RBP12.06□□□□□ -0.48
FAM228B-203ENST00000469867 SLC30A5Q8TAD4 765 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 EDEM1Q92611 657 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 LRRC1Q9BTT6 524 aa12.06□□□□□ -0.48
FAM228B-203ENST00000469867 CLEC4EQ9ULY5 219 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms