RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 GJD2Q9UKL4 321 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 SMIM31A0A1B0GVY4 71 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 MFSD11O43934 449 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 ATICP31939 592 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 CEACAM7Q14002 265 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 MYLK3Q32MK0 819 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 FAM160B1Q5W0V3 765 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 RBM44Q6ZP01 1051 aaKnown RBP10.54□□□□□ -0.72
SMC4-210ENST00000469762 NIM1KQ8IY84 436 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 MPP4Q96JB8 637 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 MIS12Q9H081 205 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 C2orf40Q9H1Z8 148 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 FAM49BQ9NUQ9 324 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 ATXN10Q9UBB4 475 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 AP4E1Q9UPM8 1137 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 DTNAQ9Y4J8 743 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 TSC2P49815 1807 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 PENKP01210 267 aaPredicted RBP10.54□□□□□ -0.72
SMC4-210ENST00000469762 GRAMD1BQ3KR37 738 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 MAP3K21Q5TCX8 1036 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 OTUD1Q5VV17 481 aaPredicted RBP10.54□□□□□ -0.72
SMC4-210ENST00000469762 CASC4Q6P4E1 433 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 KLHDC10Q6PID8 442 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 ACOT1Q86TX2 421 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 AGR3Q8TD06 166 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 DGCR14Q96DF8 476 aaKnown RBP10.54□□□□□ -0.72
SMC4-210ENST00000469762 VCX3BQ9H321 246 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 PREBQ9HCU5 417 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 VCX3AQ9NNX9 186 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 LMCD1Q9NZU5 365 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 ARHGAP26Q9UNA1 814 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 LZTS1Q9Y250 596 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
SMC4-210ENST00000469762 SBF1O95248 1867 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 GOLGA8QA0A0J9YX86 632 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 GOLGA8OA6NCC3 632 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 GOLGA8NF8WBI6 632 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PGAM1P18669 254 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PSMB4P28070 264 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 SERPINB5P36952 375 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 NR2C2P49116 596 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PITX1P78337 314 aaPredicted RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 APOFQ13790 326 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 HACE1Q8IYU2 909 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 KLHL32Q96NJ5 620 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 SLC2A11Q9BYW1 496 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 ZCWPW2A0A1B0GU75 182 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 STX16-NPEPL1H3BU86 382 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 TXNDC9O14530 226 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 DPEP1P16444 411 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 HEATR6Q6AI08 1181 aaKnown RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 FSTL4Q6MZW2 842 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 EFCAB12Q6NXP0 572 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 SDCCAG8Q86SQ7 713 aaPredicted RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 NME8Q8N427 588 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 P2RY11Q96G91 374 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 ATXN7L3BQ96GX2 97 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PPP1R16BQ96T49 567 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 NT5C1AQ9BXI3 368 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 GCOM2Q9BZD3 368 aaPredicted RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 GRID2O43424 1007 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 ACAT1P24752 427 aaKnown RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 MPSTP25325 297 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PIK3R1P27986 724 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 TYK2P29597 1187 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PTPN9P43378 593 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PHKA2P46019 1235 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 MRPS22P82650 360 aaKnown RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 NSUN2Q08J23 767 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMC4-210ENST00000469762 R3HDM1Q15032 1099 aaKnown RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 TREML2Q5T2D2 321 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 DSELQ8IZU8 1212 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 ICA1LQ8NDH6 482 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 COPS5Q92905 334 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 CERS2Q96G23 380 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 CNDP1Q96KN2 507 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 RBBP8Q99708 897 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 GATA5Q9BWX5 397 aaPredicted RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 C6orf203Q9P0P8 240 aaPredicted RBP10.53□□□□□ -0.72
SMC4-210ENST00000469762 SCN4AP35499 1836 aa10.53□□□□□ -0.72
SMC4-210ENST00000469762 PRSS51A0A1B0GVH4 220 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 RNF103O00237 685 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 MATN2O00339 956 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 TNFAIP1Q13829 316 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 ADGRE1Q14246 886 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 TMEM198Q66K66 360 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 ZNF567Q8N184 647 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 TMEM102Q8N9M5 508 aaPredicted RBP10.52□□□□□ -0.72
SMC4-210ENST00000469762 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.52□□□□□ -0.72
SMC4-210ENST00000469762 PPP4R1Q8TF05 950 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 PKP2Q99959 881 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 EIF2B3Q9NR50 452 aaKnown RBP10.52□□□□□ -0.72
SMC4-210ENST00000469762 GGA3Q9NZ52 723 aa10.52□□□□□ -0.72
SMC4-210ENST00000469762 ACOT8O14734 319 aa10.52□□□□□ -0.73
SMC4-210ENST00000469762 AIM2O14862 343 aa10.52□□□□□ -0.73
SMC4-210ENST00000469762 IRF6O14896 467 aa10.52□□□□□ -0.73
SMC4-210ENST00000469762 GAS2O43903 313 aaKnown RBP10.52□□□□□ -0.73
SMC4-210ENST00000469762 ARF4P18085 180 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms