RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 MID1O15344 667 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 MED7O43513 233 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 SIN3BO75182 1162 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 LUC7L3O95232 432 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 IGHV4-34P06331 123 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 TBC1D3HP0C7X1 549 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 SLC2A3P11169 496 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 SLC6A4P31645 630 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 SGSHP51688 502 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 CCDC15Q0P6D6 951 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 PNOCQ13519 176 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 CAMK2BQ13554 666 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 SOWAHCQ53LP3 525 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 PITRM1Q5JRX3 1037 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 TBC1D3GQ6DHY5 549 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 TBC1D3CQ6IPX1 549 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 LRRC69Q6ZNQ3 347 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 DSG4Q86SJ6 1040 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 DHX40Q8IX18 779 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 ZC3H3Q8IXZ2 948 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 TBC1D3Q8IZP1 549 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 UBR7Q8N806 425 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 STK32AQ8WU08 396 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 FAM149B1Q96BN6 582 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 DHTKD1Q96HY7 919 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 MIS12Q9H081 205 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 ERVMER34-1Q9H9K5 563 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 ST7Q9NRC1 585 aa13.12□□□□□ -0.31
GAPVD1-214ENST00000469528 ACACAQ13085 2346 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 PTPRBP23467 1997 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 TLR4O00206 839 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 PIK3R2O00459 728 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 RRP8O43159 456 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 RFPL3O75679 317 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 RPS24P62847 133 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 GCNT1Q02742 428 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 OVGP1Q12889 678 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 ILKQ13418 452 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 CCDC40Q4G0X9 1142 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 FAM46CQ5VWP2 391 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 DHRS13Q6UX07 377 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 ATP6V0D2Q8N8Y2 350 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 WFDC5Q8TCV5 224 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 TFAP2BQ92481 460 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 NXPE2Q96DL1 559 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 MYO19Q96H55 970 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 CNDP2Q96KP4 475 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 BTN2A3PQ96KV6 586 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 FAM81BQ96LP2 452 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 GOLPH3LQ9H4A5 285 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 SLCO1B1Q9Y6L6 691 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 KNTC1P50748 2209 aa13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 GOLGA4Q13439 2230 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-214ENST00000469528 FAM149AA5PLN7 773 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 SLC7A4O43246 635 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 GNA14O95837 355 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 IL1BP01584 269 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 RXRGP48443 463 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 SNX16P57768 344 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 IL9RQ01113 521 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 ELAVL3Q14576 367 aaKnown RBP13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 STAT4Q14765 748 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 MEA1Q16626 185 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 DCAF6Q58WW2 860 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 KCNT1Q5JUK3 1230 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 IQCHQ86VS3 1027 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 LGI2Q8N0V4 545 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 CFAP52Q8N1V2 620 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 MFSD2AQ8NA29 543 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 EHBP1Q8NDI1 1231 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 DQX1Q8TE96 717 aaKnown RBP13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 SAP25Q8TEE9 199 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 SLC39A13Q96H72 371 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 FCRL2Q96LA5 508 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 SLC6A18Q96N87 628 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 FAM129BQ96TA1 746 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 ORAI3Q9BRQ5 295 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 NRSN2Q9GZP1 204 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 POPDC2Q9HBU9 364 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 INTS6Q9UL03 887 aaKnown RBP13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 ZDHHC9Q9Y397 364 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 AK5Q9Y6K8 562 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 ITPR1Q14643 2758 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
GAPVD1-214ENST00000469528 FASNP49327 2511 aaKnown RBP13.09□□□□□ -0.31
GAPVD1-214ENST00000469528 NUMA1Q14980 2115 aa13.09□□□□□ -0.31
GAPVD1-214ENST00000469528 BICDL2A1A5D9 508 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms