RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 C2CD6Q53TS8 623 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 TRIM61Q5EBN2 209 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 BRMS1LQ5PSV4 323 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 FBXL22Q6P050 247 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 SND1Q7KZF4 910 aaKnown RBP eCLIP18.87■□□□□ 0.616e-10■■■■□ 20.7
PHGDH-204ENST00000469443 CACUL1Q86Y37 369 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 CCAR2Q8N163 923 aaKnown RBP18.87■□□□□ 0.61
PHGDH-204ENST00000469443 ZNF419Q96HQ0 510 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-204ENST00000469443 HSPA12BQ96MM6 686 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 PCDH15Q96QU1 1955 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 ATXN2Q99700 1313 aaKnown RBP18.87■□□□□ 0.61
PHGDH-204ENST00000469443 BPIFA3Q9BQP9 254 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 NUSAP1Q9BXS6 441 aaKnown RBP18.87■□□□□ 0.61
PHGDH-204ENST00000469443 WDCPQ9H6R7 721 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 PRSS16Q9NQE7 514 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 TMEM51Q9NW97 253 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 HS3ST4Q9Y661 456 aa18.87■□□□□ 0.61
PHGDH-204ENST00000469443 PAGE1O75459 146 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 F9P00740 461 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 SRPRAP08240 638 aaKnown RBP18.86■□□□□ 0.61
PHGDH-204ENST00000469443 ATP1A3P13637 1013 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 TFE3P19532 575 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-204ENST00000469443 FLT3P36888 993 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 DEUP1Q05D60 604 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 SLC23A3Q6PIS1 610 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 TRIM72Q6ZMU5 477 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 CIR1Q86X95 450 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-204ENST00000469443 KDM1BQ8NB78 822 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 CEP76Q8TAP6 659 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 FOXJ1Q92949 421 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 IGSF8Q969P0 613 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 TOE1Q96GM8 510 aaKnown RBP18.86■□□□□ 0.61
PHGDH-204ENST00000469443 MRGPRX3Q96LB0 322 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 RPRD1AQ96P16 312 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-204ENST00000469443 TBCBQ99426 244 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 ARHGEF38Q9NXL2 777 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 TMEM59LQ9UK28 342 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 VANGL2Q9ULK5 521 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 ERVW-1Q9UQF0 538 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 PAXBP1Q9Y5B6 917 aa18.86■□□□□ 0.61
PHGDH-204ENST00000469443 TM4SF5O14894 197 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 ADCY5O95622 1261 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 OXCT1P55809 520 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 DUOXA1Q1HG43 343 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 SYCP2LQ5T4T6 812 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 ARCQ7LC44 396 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 RABEPKQ7Z6M1 372 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 APCDD1Q8J025 514 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 GPR174Q9BXC1 333 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 TKTL2Q9H0I9 626 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 TMEM9BQ9NQ34 198 aa18.85■□□□□ 0.61
PHGDH-204ENST00000469443 NCOR2Q9Y618 2525 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 ITIH6Q6UXX5 1313 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 C4orf47A7E2U8 309 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 SMTNL1A8MU46 457 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 PDGFRAP16234 1089 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 MMP8P22894 467 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 GGCXP38435 758 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 CTSOP43234 321 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-204ENST00000469443 PLK1P53350 603 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 RPS14P62263 151 aaKnown RBP18.84■□□□□ 0.61
PHGDH-204ENST00000469443 ECT2LQ008S8 904 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 CENPCQ03188 943 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 ZBTB16Q05516 673 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 ARID5BQ14865 1188 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 HNRNPA1L2Q32P51 320 aaKnown RBP18.84■□□□□ 0.61
PHGDH-204ENST00000469443 C5orf22Q49AR2 442 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 CXorf57Q6NSI4 855 aaKnown RBP18.84■□□□□ 0.61
PHGDH-204ENST00000469443 TRNP1Q6NT89 227 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 DHX40Q8IX18 779 aaKnown RBP18.84■□□□□ 0.61
PHGDH-204ENST00000469443 RGL4Q8IZJ4 473 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 CADM4Q8NFZ8 388 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 SIK2Q9H0K1 926 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 MTG2Q9H4K7 406 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 ANLNQ9NQW6 1124 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 METTL5Q9NRN9 209 aaKnown RBP18.84■□□□□ 0.61
PHGDH-204ENST00000469443 SLC6A14Q9UN76 642 aa18.84■□□□□ 0.61
PHGDH-204ENST00000469443 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 CDX4O14627 284 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 CFIP05156 583 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 SERPINF2P08697 491 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 UNGP13051 313 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 MZF1P28698 734 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 IRAK1P51617 712 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 SULT2A1Q06520 285 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 ZNF177Q13360 481 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 PPM1JQ5JR12 505 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 WDR45BQ5MNZ6 344 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 RNF219Q5W0B1 726 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 ZNF776Q68DI1 518 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 BNIPLQ7Z465 357 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 C14orf80Q86SX3 495 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 SLC30A5Q8TAD4 765 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 CFAP57Q96MR6 1250 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 PPP1R9BQ96SB3 815 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 PCDHB18PQ96TA0 734 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 C11orf70Q9BRQ4 267 aa18.83■□□□□ 0.6
PHGDH-204ENST00000469443 RSPH9Q9H1X1 276 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-204ENST00000469443 TP53BP1Q12888 1972 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms