RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ADCY8P40145 1251 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 PBX2P40425 430 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 RING1Q06587 406 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 WASHC5Q12768 1159 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 GPS1Q13098 491 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 ARL13BQ3SXY8 428 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 IZUMO3Q5VZ72 239 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 GAREM2Q75VX8 874 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 MIB1Q86YT6 1006 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 CCDC89Q8N998 374 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 PRCCQ92733 491 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 VMP1Q96GC9 406 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 HTATIP2Q9BUP3 242 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 ASIC3Q9UHC3 531 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 SHROOM3Q8TF72 1996 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 GOLGA6L7A0A1B0GV03 622 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 WASH4PA8MWX3 477 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 MCF2LO15068 1137 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 OLFM2O95897 454 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 SLC6A4P31645 630 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 STIP1P31948 543 aaKnown RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 TUBP50607 506 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 TPI1P60174 286 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 CBLBQ13191 982 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 HLTFQ14527 1009 aaKnown RBP eCLIP8.5□□□□□ -1.053e-6■■□□□ 13.4
BRCA1-208ENST00000468300 FAM133BQ5BKY9 247 aaKnown RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 C10orf120Q5SQS8 335 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 DARS2Q6PI48 645 aaKnown RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 GSTA5Q7RTV2 222 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 MYO1HQ8N1T3 1032 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 PAF1Q8N7H5 531 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 GOLGA6L1Q8N7Z2 621 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 IGSF8Q969P0 613 aa8.5□□□□□ -1.05
BRCA1-208ENST00000468300 KLF16Q9BXK1 252 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 OLA1Q9NTK5 396 aaKnown RBP8.5□□□□□ -1.05
BRCA1-208ENST00000468300 DRGXA6NNA5 263 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 GCATO75600 419 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 TMEM63AO94886 807 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 METTL18O95568 372 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 CA3P07451 260 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 NEFHP12036 1026 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 CREMQ03060 361 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 GALNT2Q10471 571 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 PLD1Q13393 1074 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 KCNJ11Q14654 390 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 C5orf22Q49AR2 442 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ARHGAP36Q6ZRI8 547 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ABHD8Q96I13 439 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ZIM3Q96PE6 472 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 FAM129AQ9BZQ8 928 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 SIK2Q9H0K1 926 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 UTP6Q9NYH9 597 aaKnown RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 CPSF2Q9P2I0 782 aaKnown RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 C5orf60A6NFR6 353 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 KCNN4O15554 427 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 CNTN5O94779 1100 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 SRGAP2BP0DMP2 458 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 EPHB2P29323 1055 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 CCR2P41597 374 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 MAGEA6P43360 314 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ALDH1A3P47895 512 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 DHX9Q08211 1270 aaKnown RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 MSS51Q4VC12 460 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ALFQ53S48 1182 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 PLPP4Q5VZY2 271 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 TMC7Q7Z402 723 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 RELL1Q8IUW5 271 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 PDZD8Q8NEN9 1154 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 SLC22A17Q8WUG5 538 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 CYP2S1Q96SQ9 504 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 SH3GL2Q99962 352 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 SEMA4AQ9H3S1 761 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 PRDM12Q9H4Q4 367 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 TLR9Q9NR96 1032 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 MPP6Q9NZW5 540 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 PPARGC1AQ9UBK2 798 aaKnown RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 SLC12A8A0AV02 714 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 HACD1B0YJ81 288 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 H3BNC9 293 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 H7C0C1 242 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 GFRA2O00451 464 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 PRRG1O14668 218 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 MOCS2O96007 188 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 IFNB1P01574 187 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ATP5OP48047 213 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF135P52742 658 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 PPIDQ08752 370 aaKnown RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 FNBP1LQ5T0N5 605 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 TTC19Q6DKK2 380 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 FBXL22Q6P050 247 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF534Q76KX8 674 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ZCCHC9Q8N567 271 aaKnown RBP8.49□□□□□ -1.05
BRCA1-208ENST00000468300 CCDC110Q8TBZ0 833 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 RNF34Q969K3 372 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 MPP4Q96JB8 637 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 BTN2A3PQ96KV6 586 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms