RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 AMPD1P23109 780 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 CETN2P41208 172 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 SGSHP51688 502 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 DYNLT1P63172 113 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 PPP2R5EQ16537 467 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 TAZQ16635 292 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 ACBD5Q5T8D3 534 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 PARM1Q6UWI2 310 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 OTOP3Q7RTS5 596 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 ADAT2Q7Z6V5 191 aaKnown RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 CIR1Q86X95 450 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 VSIG1Q86XK7 387 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 LGI2Q8N0V4 545 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 BPIFB1Q8TDL5 484 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 BHMTQ93088 406 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 TBC1D31Q96DN5 1066 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 THOC1Q96FV9 657 aaKnown RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 PRICKLE1Q96MT3 831 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 RPRD1AQ96P16 312 aaPredicted RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 RNF157Q96PX1 679 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 MAK16Q9BXY0 300 aaKnown RBP7.07□□□□□ -1.28
SCAF4-204ENST00000467731 ZFP14Q9HCL3 533 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 PRDM6Q9NQX0 595 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 ARHGEF4Q9NR80 690 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 ETNK2Q9NVF9 386 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 SUN2Q9UH99 717 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF510Q9Y2H8 683 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 WNT6Q9Y6F9 365 aa7.07□□□□□ -1.28
SCAF4-204ENST00000467731 IGLV3-10A0A075B6K4 115 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TCRBV7S2A1N4TA0A589 114 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 H3BRJ5 948 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TSPAN3O60637 253 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 CST8O60676 142 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ERCC2P18074 760 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 HOXC13P31276 330 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 PTPN7P35236 360 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 CHKAP35790 457 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF135P52742 658 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 RPS24P62847 133 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 KLF1Q13351 362 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 DPYSQ14117 519 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ALFQ53S48 1182 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 VITQ6UXI7 678 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 LRRC31Q6UY01 552 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TPGS1Q6ZTW0 290 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 SLC13A5Q86YT5 568 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 RFX6Q8HWS3 928 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 FAM217AQ8IXS0 508 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 CFAP52Q8N1V2 620 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 PQLC3Q8N755 202 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 PLD5Q8N7P1 536 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ACTRT1Q8TDG2 376 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ASIC4Q96FT7 647 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 P2RY11Q96G91 374 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ZFYVE19Q96K21 471 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 KXD1Q9BQD3 176 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 LINC00597Q9H2U6 94 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 CDC23Q9UJX2 597 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 MFHAS1Q9Y4C4 1052 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 MRFAP1Q9Y605 127 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ZFP37Q9Y6Q3 630 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 MIA3Q5JRA6 1907 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ZNF487B1APH4 448 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 C2CD4DB7Z1M9 353 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 PGRMC1O00264 195 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 CNTN5O94779 1100 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 NAT1P18440 290 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 HCAR3P49019 387 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 SMAD2Q15796 467 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 LONRF2Q1L5Z9 754 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TBC1D25Q3MII6 688 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 LEXMQ3ZCV2 418 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 CCDC181Q5TID7 509 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 SLC9A4Q6AI14 798 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TRIM68Q6AZZ1 485 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TFAP2DQ7Z6R9 452 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ZDHHC14Q8IZN3 488 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 CPXM2Q8N436 756 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TDRD5Q8NAT2 981 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 GIMAP7Q8NHV1 300 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 KCNV2Q8TDN2 545 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 HAUS1Q96CS2 278 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ARPC5LQ9BPX5 153 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 DDX50Q9BQ39 737 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 RPP25Q9BUL9 199 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 PLA2G2FQ9BZM2 168 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 ZYG11BQ9C0D3 744 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 OBP2AQ9NY56 170 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TBC1D14Q9P2M4 693 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 EPS15L1Q9UBC2 864 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 SAE1Q9UBE0 346 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 PPARGC1AQ9UBK2 798 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 TTC7AQ9ULT0 858 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 EFR3BQ9Y2G0 817 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 V9GYY5 206 aaPredicted RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 NYNRINQ9P2P1 1898 aaKnown RBP7.06□□□□□ -1.28
SCAF4-204ENST00000467731 F5P12259 2224 aa7.06□□□□□ -1.28
SCAF4-204ENST00000467731 MYO18AQ92614 2054 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms