RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	SEMA4G	Q9NTN9	838 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	USP18	Q9UMW8	372 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	ZNF510	Q9Y2H8	683 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	MYO16	Q9Y6X6	1858 aa		12.48	□□□□□ -0.41
CTNS-205	ENST00000467663	ATG2B	Q96BY7	2078 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	KIAA1549L	Q6ZVL6	1849 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	TBC1D3B	A6NDS4	549 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	SGK1	O00141	431 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	FANCG	O15287	622 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	CACNG3	O60359	315 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	GABBR2	O75899	941 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	SLU7	O95391	586 aa	Known RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	KLF8	O95600	359 aa	Predicted RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	LTF	P02788	710 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	KLKB1	P03952	638 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	SDHB	P21912	280 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	TIE1	P35590	1138 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	PEX5	P50542	639 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	MTA1	Q13330	715 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	RSPO4	Q2I0M5	234 aa	Predicted RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	SLC25A52	Q3SY17	297 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	BOLA3	Q53S33	107 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	EOGT	Q5NDL2	527 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	SEL1L2	Q5TEA6	688 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	CCDC181	Q5TID7	509 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	TMEM92	Q6UXU6	159 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	NUDT18	Q6ZVK8	323 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	MIB1	Q86YT6	1006 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	PSTK	Q8IV42	348 aa	Known RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	KATNAL2	Q8IYT4	538 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	RASGEF1C	Q8N431	466 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	TERB1	Q8NA31	727 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	TXNDC5	Q8NBS9	432 aa	Known RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	JOSD2	Q8TAC2	188 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	RXFP2	Q8WXD0	754 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	CENPI	Q92674	756 aa	Predicted RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	NT5C3B	Q969T7	300 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	FAM149B1	Q96BN6	582 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	PGAP3	Q96FM1	320 aa	Predicted RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	RBM41	Q96IZ5	413 aa	Known RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	SLC2A13	Q96QE2	648 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	XPO6	Q96QU8	1125 aa	Known RBP	12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	BBS2	Q9BXC9	721 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	ULBP1	Q9BZM6	244 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	DCLK3	Q9C098	648 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	ABCC13	Q9NSE7	274 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	TJP2	Q9UDY2	1190 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	RASAL2	Q9UJF2	1139 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	STARD13	Q9Y3M8	1113 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	FRYL	O94915	3013 aa		12.47	□□□□□ -0.41
CTNS-205	ENST00000467663	TMEM110-MUSTN1	A8MSY1	372 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	NEDD8-MDP1	E9PL57	170 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	KCNK3	O14649	394 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	CAPN9	O14815	690 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	TRIM24	O15164	1050 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	DDX3Y	O15523	660 aa	Known RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	FOXD2	O60548	495 aa	Predicted RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	ADAM23	O75077	832 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	ENDOD1	O94919	500 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	EPN2	O95208	641 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	TYR	P14679	529 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	HNRNPL	P14866	589 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	CHKA	P35790	457 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	EFEMP1	Q12805	493 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	PLK5	Q496M5	336 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	USP39	Q53GS9	565 aa	Known RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	ODF2	Q5BJF6	829 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	GRAMD4	Q6IC98	578 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	TPGS1	Q6ZTW0	290 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	RCOR2	Q8IZ40	523 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	MDGA1	Q8NFP4	955 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	EXD1	Q8NHP7	514 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	TEKT4	Q8WW24	435 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	NDRG1	Q92597	394 aa	Known RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	PRDM16	Q9HAZ2	1276 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	OLA1	Q9NTK5	396 aa	Known RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	DNAJC17	Q9NVM6	304 aa	Known RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	MARCH2	Q9P0N8	246 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	FBXO10	Q9UK96	956 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	HCN2	Q9UL51	889 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	EFR3B	Q9Y2G0	817 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	PCDHGA5	Q9Y5G8	931 aa		12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	12.46	□□□□□ -0.41
CTNS-205	ENST00000467663	CEP250	Q9BV73	2442 aa		12.46	□□□□□ -0.42
CTNS-205	ENST00000467663	CTAGE15	A4D2H0	777 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	YJEFN3	A6XGL0	299 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	ZNF487	B1APH4	448 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663		E7ENQ6	273 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	PGRMC1	O00264	195 aa	Known RBP	12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	PRPSAP2	O60256	369 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	LRCH4	O75427	683 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	ALDH1A2	O94788	518 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	PENK	P01210	267 aa	Predicted RBP	12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	CISD3	P0C7P0	127 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	CTAGE8	P0CG41	777 aa		12.45	□□□□□ -0.42
CTNS-205	ENST00000467663	GBP1	P32455	592 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms