RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TTC34A8MYJ7 566 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 LZTS3O60299 673 aaPredicted RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 SRPRAP08240 638 aaKnown RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 GIMD1P0DJR0 217 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 ABCB4P21439 1286 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 CMA1P23946 247 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 ME1P48163 572 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 ARRB1P49407 418 aaPredicted RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 PPP2CBP62714 309 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 RPS24P62847 133 aaKnown RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 PPP2CAP67775 309 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 DPYDQ12882 1025 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 ADAM9Q13443 819 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 EIF4EBP2Q13542 120 aaPredicted RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 PITRM1Q5JRX3 1037 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 CDCP2Q5VXM1 449 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 NUGGCQ68CJ6 796 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 PMF1Q6P1K2 205 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 LCLAT1Q6UWP7 414 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 LRRC69Q6ZNQ3 347 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 MMS22LQ6ZRQ5 1243 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 MMAAQ8IVH4 418 aaKnown RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 MFN1Q8IWA4 741 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 UNC45BQ8IWX7 931 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 DHX40Q8IX18 779 aaKnown RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 SPACA3Q8IXA5 215 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 SLC25A45Q8N413 288 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 HJURPQ8NCD3 748 aaPredicted RBP12.64□□□□□ -0.39
UBR4-211ENST00000467272 RNF139Q8WU17 664 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 FRS2Q8WU20 508 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 TFAP2BQ92481 460 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 BAP1Q92560 729 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 SKA1Q96BD8 255 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 USP25Q9UHP3 1055 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 PTPN13Q12923 2485 aa12.64□□□□□ -0.39
UBR4-211ENST00000467272 SHROOM3Q8TF72 1996 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 FAM47DPA6NHR8 397 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 K7ELQ4 463 aaPredicted RBP12.63□□□□□ -0.39
UBR4-211ENST00000467272 ERVH48-1M5A8F1 160 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 TRIM38O00635 465 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 RNASEH2AO75792 299 aaKnown RBP12.63□□□□□ -0.39
UBR4-211ENST00000467272 F13A1P00488 732 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 ZSCAN22P10073 491 aaPredicted RBP12.63□□□□□ -0.39
UBR4-211ENST00000467272 KRT13P13646 458 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 PFKFB1P16118 471 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 C5AR1P21730 350 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 SLC11A2P49281 568 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 MXI1P50539 228 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 METAP1P53582 386 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 SLC8A3P57103 927 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 SFSWAPQ12872 951 aaKnown RBP12.63□□□□□ -0.39
UBR4-211ENST00000467272 OVGP1Q12889 678 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 ZNF211Q13398 564 aaPredicted RBP12.63□□□□□ -0.39
UBR4-211ENST00000467272 NNTQ13423 1086 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 CUL2Q13617 745 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 CBWD6Q4V339 395 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 SGO2Q562F6 1265 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 MS4A13Q5J8X5 152 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 CBWD3Q5JTY5 395 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 CBWD5Q5RIA9 395 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 NAPEPLDQ6IQ20 393 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 ZNF605Q86T29 641 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 OXR1Q8N573 874 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 CCDC150Q8NCX0 1101 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 UBA3Q8TBC4 463 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 SERAC1Q96JX3 654 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 IPO9Q96P70 1041 aaKnown RBP12.63□□□□□ -0.39
UBR4-211ENST00000467272 KDM4CQ9H3R0 1056 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 LRRC4Q9HBW1 653 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 AASDHPPTQ9NRN7 309 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 KIAA1257Q9ULG3 409 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 AK5Q9Y6K8 562 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 COL12A1Q99715 3063 aa12.63□□□□□ -0.39
UBR4-211ENST00000467272 TP53BP1Q12888 1972 aaPredicted RBP12.62□□□□□ -0.39
UBR4-211ENST00000467272 RNASEH1O60930 286 aaKnown RBP12.62□□□□□ -0.39
UBR4-211ENST00000467272 ADH1BP00325 375 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 VDRP11473 427 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 GLDCP23378 1020 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 RPL13P26373 211 aaKnown RBP12.62□□□□□ -0.39
UBR4-211ENST00000467272 MZF1P28698 734 aaPredicted RBP12.62□□□□□ -0.39
UBR4-211ENST00000467272 ACTN2P35609 894 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 ST8SIA6P61647 398 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 CFHR1Q03591 330 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 DCAF6Q58WW2 860 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 SND1Q7KZF4 910 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBR4-211ENST00000467272 BEND5Q7L4P6 421 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 TRIM69Q86WT6 500 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 TMEM145Q8NBT3 493 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 CLEC4CQ8WTT0 213 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 NUCKS1Q9H1E3 243 aaKnown RBP12.62□□□□□ -0.39
UBR4-211ENST00000467272 MMRN2Q9H8L6 949 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 CYTH4Q9UIA0 394 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms