RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 GOLGA8QA0A0J9YX86 632 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 GOLGA8OA6NCC3 632 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 GOLGA8NF8WBI6 632 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 GAS2O43903 313 aaKnown RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ZFXP17010 805 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 XRCC1P18887 633 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 PIK3R1P27986 724 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 MSX2P35548 267 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 GP5P40197 560 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 CLCN3P51790 818 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 MRPS22P82650 360 aaKnown RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 SNX32Q86XE0 403 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 LILRA2Q8N149 483 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 PYROXD2Q8N2H3 581 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 CCDC185Q8N715 623 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 FCRL3Q96P31 734 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 WDR55Q9H6Y2 383 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 PREBQ9HCU5 417 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 AP4B1Q9Y6B7 739 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 USP3Q9Y6I4 520 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 SOWAHBA6NEL2 793 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 NFKBIEO00221 500 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 TOMM70O94826 608 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ZBTB7AO95365 584 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ARIH2O95376 493 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 USP46P62068 366 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ADGRE1Q14246 886 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 CNGA3Q16281 694 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ZNF423Q2M1K9 1284 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 CCDC153Q494R4 210 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 METTL21CQ5VZV1 264 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 LCA5Q86VQ0 697 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 SLC35F5Q8WV83 523 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ISL2Q96A47 359 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ATXN7L3BQ96GX2 97 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 TCF7L2Q9NQB0 619 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 ACSS2Q9NR19 701 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 FAM49BQ9NUQ9 324 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 GTF2IRD1Q9UHL9 959 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 RAB26Q9ULW5 256 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 PRPF19Q9UMS4 504 aaKnown RBP13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 NME7Q9Y5B8 376 aa13.3□□□□□ -0.28
PDZRN3-205ENST00000466780 CCDC130P13994 396 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 GOT1P17174 413 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 EDNRBP24530 442 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 RPS12P25398 132 aaKnown RBP13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 GTF2A2P52657 109 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 IRF9Q00978 393 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 OLIG2Q13516 323 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 DLG2Q15700 870 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 MYLK3Q32MK0 819 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 PAOXQ6QHF9 649 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 B3GNT6Q6ZMB0 384 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 DSELQ8IZU8 1212 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 TDRD5Q8NAT2 981 aaKnown RBP13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 ZFP28Q8NHY6 868 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 CERS2Q96G23 380 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 CNBD2Q96M20 576 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 CDRT15Q96T59 188 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 GRIP2Q9C0E4 1043 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 EIF2B3Q9NR50 452 aaKnown RBP13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 GGA3Q9NZ52 723 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 LMCD1Q9NZU5 365 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 APPL1Q9UKG1 709 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 RNF103O00237 685 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 LTFP02788 710 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 PSMB4P28070 264 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 PTPN9P43378 593 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 ABCG1P45844 678 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 CDKL1Q00532 357 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 MS4A2Q01362 244 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 PIGGQ5H8A4 983 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 ACOT1Q86TX2 421 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 KBTBD7Q8WVZ9 684 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 CENPIQ92674 756 aaPredicted RBP13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 GPR20Q99678 358 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 CPNE1Q99829 537 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 LPIN3Q9BQK8 851 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 ZNF696Q9H7X3 374 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 COPS7BQ9H9Q2 264 aaPredicted RBP13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 TXNDC16Q9P2K2 825 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 ZNF112Q9UJU3 913 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 RPS6KL1Q9Y6S9 549 aa13.29□□□□□ -0.28
PDZRN3-205ENST00000466780 HNRNPRO43390 633 aaKnown RBP13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 MFSD11O43934 449 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 AMHP03971 560 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 CHRNGP07510 517 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 SRGAP2BP0DMP2 458 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 THRAP10827 490 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 ATP6V1B1P15313 513 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 MPSTP25325 297 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 PKNOX1P55347 436 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 CEACAM7Q14002 265 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 FLOT2Q14254 428 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 TMEM132DQ14C87 1099 aa13.28□□□□□ -0.28
PDZRN3-205ENST00000466780 RARS2Q5T160 578 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms