RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CYP1A1P04798 512 aaPredicted RBP22.48■■□□□ 1.19
LIME1-203ENST00000465591 MAOBP27338 520 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 MZF1P28698 734 aaPredicted RBP22.48■■□□□ 1.19
LIME1-203ENST00000465591 SCNN1AP37088 669 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 RPS14P62263 151 aaKnown RBP22.48■■□□□ 1.19
LIME1-203ENST00000465591 CDR2Q01850 454 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 UBXN1Q04323 297 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 ANO6Q4KMQ2 910 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 CXorf57Q6NSI4 855 aaKnown RBP22.48■■□□□ 1.19
LIME1-203ENST00000465591 SLC23A3Q6PIS1 610 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 TMPRSS4Q9NRS4 437 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 TMEM59LQ9UK28 342 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 VANGL2Q9ULK5 521 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 ERVW-1Q9UQF0 538 aa22.48■■□□□ 1.19
LIME1-203ENST00000465591 DOCK4Q8N1I0 1966 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 ASLP04424 464 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 CFIP05156 583 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 PDGFRAP16234 1089 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 CDK11BP21127 795 aaKnown RBP22.47■■□□□ 1.19
LIME1-203ENST00000465591 CXCR3P49682 368 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 PHLDB2Q86SQ0 1253 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 FAM124AQ86V42 546 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 ZNF677Q86XU0 584 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 CCDC117Q8IWD4 279 aaPredicted RBP22.47■■□□□ 1.19
LIME1-203ENST00000465591 RPRD1AQ96P16 312 aaPredicted RBP22.47■■□□□ 1.19
LIME1-203ENST00000465591 SPAG5Q96R06 1193 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 ERGIC2Q96RQ1 377 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 PCDHB18PQ96TA0 734 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 CAPN10Q9HC96 672 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 TMEM9BQ9NQ34 198 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 ARHGEF38Q9NXL2 777 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 SLCO3A1Q9UIG8 710 aa22.47■■□□□ 1.19
LIME1-203ENST00000465591 A0A1B0GVM2 712 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 TCAF2A6NFQ2 919 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 TTC34A8MYJ7 566 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 SIN3BO75182 1162 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 ACADMP11310 421 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 ENGP17813 658 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 HOXD12P35452 270 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 STAT1P42224 750 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 STK19P49842 368 aaPredicted RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 DUOXA1Q1HG43 343 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 HNRNPA1L2Q32P51 320 aaKnown RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 SLC25A52Q3SY17 297 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 RABGAP1LQ5R372 815 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 ARTNQ5T4W7 220 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 CAVIN1Q6NZI2 390 aaKnown RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 BNIPLQ7Z465 357 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 DHX40Q8IX18 779 aaKnown RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 ANKRD20A12PQ8NF67 263 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 NEK11Q8NG66 645 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 SLC30A5Q8TAD4 765 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 ALG14Q96F25 216 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 PGAP3Q96FM1 320 aaPredicted RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 RPL10LQ96L21 214 aaKnown RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 PCMTD1Q96MG8 357 aaPredicted RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 NUSAP1Q9BXS6 441 aaKnown RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 TKTL2Q9H0I9 626 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 SIK2Q9H0K1 926 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 RRN3Q9NYV6 651 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 SUN2Q9UH99 717 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 STAP1Q9ULZ2 295 aa22.46■■□□□ 1.19
LIME1-203ENST00000465591 TPRP12270 2363 aaKnown RBP22.46■■□□□ 1.19
LIME1-203ENST00000465591 KCNA4P22459 653 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 MMP8P22894 467 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 OXTRP30559 389 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 DPP6P42658 865 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 MAPK8P45983 427 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 ST8SIA6P61647 398 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 ECT2LQ008S8 904 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 DEUP1Q05D60 604 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 C5orf22Q49AR2 442 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 RAB6CQ53S08 254 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 TTC39BQ5VTQ0 682 aaPredicted RBP22.45■■□□□ 1.18
LIME1-203ENST00000465591 ZNF683Q8IZ20 524 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 RGL4Q8IZJ4 473 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 EMC1Q8N766 993 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 CFAP57Q96MR6 1250 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 RAB6CQ9H0N0 254 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 WDCPQ9H6R7 721 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 METTL5Q9NRN9 209 aaKnown RBP22.45■■□□□ 1.18
LIME1-203ENST00000465591 SLC6A14Q9UN76 642 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 DAAM1Q9Y4D1 1078 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 PCNX2A6NKB5 2137 aa22.45■■□□□ 1.18
LIME1-203ENST00000465591 TEX33O43247 280 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 CNTN5O94779 1100 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 MOCS3O95396 460 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 GJB6O95452 261 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 SRPRAP08240 638 aaKnown RBP22.44■■□□□ 1.18
LIME1-203ENST00000465591 SERPINF2P08697 491 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 ACSL1P33121 698 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 PLK1P53350 603 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 PTP4A2Q12974 167 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 ALFQ53S48 1182 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 BRMS1LQ5PSV4 323 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 C9orf64Q5T6V5 341 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 ITIH6Q6UXX5 1313 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 KDM1BQ8NB78 822 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 OR2I1PQ8NGU4 316 aa22.44■■□□□ 1.18
LIME1-203ENST00000465591 DNASE2BQ8WZ79 361 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms