RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SPRY3O43610 288 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 NEURL1O76050 574 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 HARSP12081 509 aaKnown RBP5.65□□□□□ -1.5
SMC4-205ENST00000465563 SLC5A1P13866 664 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 IGFBP2P18065 325 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 HOXD3P31249 432 aaPredicted RBP5.65□□□□□ -1.5
SMC4-205ENST00000465563 PCYT1AP49585 367 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 TLE3Q04726 772 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 GPR18Q14330 331 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 ENTPD8Q5MY95 495 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 ANKRD40Q6AI12 368 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 HIBCHQ6NVY1 386 aaPredicted RBP5.65□□□□□ -1.5
SMC4-205ENST00000465563 FBXO38Q6PIJ6 1188 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 RTL10Q7L3V2 364 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 CUZD1Q86UP6 607 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 GABPB2Q8TAK5 448 aaPredicted RBP5.65□□□□□ -1.5
SMC4-205ENST00000465563 ZNF419Q96HQ0 510 aaPredicted RBP5.65□□□□□ -1.5
SMC4-205ENST00000465563 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.65□□□□□ -1.5
SMC4-205ENST00000465563 TM6SF1Q9BZW5 370 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 MAGEH1Q9H213 219 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 C6orf106Q9H6K1 298 aaPredicted RBP5.65□□□□□ -1.5
SMC4-205ENST00000465563 PTGDR2Q9Y5Y4 395 aa5.65□□□□□ -1.5
SMC4-205ENST00000465563 TCF20Q9UGU0 1960 aaKnown RBP5.64□□□□□ -1.51
SMC4-205ENST00000465563 A0A1B0GVT2 93 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 C3orf70A6NLC5 250 aaPredicted RBP5.64□□□□□ -1.51
SMC4-205ENST00000465563 KIF3BO15066 747 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 ARSBP15848 533 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 Q0VFX4 171 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 PMS2P11Q13670 270 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 KRTAP27-1Q3LI81 207 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 ERAP2Q6P179 960 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 LMO3Q8TAP4 145 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 ADAD1Q96M93 576 aaKnown RBP5.64□□□□□ -1.51
SMC4-205ENST00000465563 OSBPL5Q9H0X9 879 aaPredicted RBP5.64□□□□□ -1.51
SMC4-205ENST00000465563 CDT1Q9H211 546 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 FAM50BQ9Y247 325 aa5.64□□□□□ -1.51
SMC4-205ENST00000465563 LOC105369274A0A096LPK9 316 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 LOC102723532A0A0G2JNH3 316 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 M0QYT0 321 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 RGS14O43566 566 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 NTSR2O95665 410 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 CER1O95813 267 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 TAS2R50P59544 299 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 GPS2Q13227 327 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 DGKKQ5KSL6 1271 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 PRAMEF19Q5SWL8 479 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 OTUD1Q5VV17 481 aaPredicted RBP5.63□□□□□ -1.51
SMC4-205ENST00000465563 OR4N4Q8N0Y3 316 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 CADM3Q8N126 398 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 SLC25A41Q8N5S1 370 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 BRI3BPQ8WY22 251 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 MCRS1Q96EZ8 462 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 RMI1Q9H9A7 625 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 PNRC2Q9NPJ4 139 aaKnown RBP5.63□□□□□ -1.51
SMC4-205ENST00000465563 NECTIN3Q9NQS3 549 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 RNF146Q9NTX7 359 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 FZD10Q9ULW2 581 aa5.63□□□□□ -1.51
SMC4-205ENST00000465563 GLP2RO95838 553 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 LCATP04180 440 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 SLC16A2P36021 539 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 SHBQ15464 509 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 IZUMO4Q1ZYL8 232 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 SLC35G1Q2M3R5 365 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 DCAF12L2Q5VW00 463 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 ARL6IP4Q66PJ3 421 aaKnown RBP5.62□□□□□ -1.51
SMC4-205ENST00000465563 MDGA2Q7Z553 956 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 IP6K1Q92551 441 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 ZNF566Q969W8 418 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 EPS8L2Q9H6S3 715 aa5.62□□□□□ -1.51
SMC4-205ENST00000465563 CLEC18AA5D8T8 446 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 KCNJ18B7U540 433 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 PCDH17O14917 1159 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 FGF18O76093 207 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 IGKV3-20P01619 116 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 PKMP14618 531 aaKnown RBP5.61□□□□□ -1.51
SMC4-205ENST00000465563 CHRNA5P30532 468 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 STAT1P42224 750 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 ART1P52961 327 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 FOXL2P58012 376 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 RPL15P61313 204 aaKnown RBP5.61□□□□□ -1.51
SMC4-205ENST00000465563 DSC1Q08554 894 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 TRAF1Q13077 416 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 GRM4Q14833 912 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 COBLL1Q53SF7 1204 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 FAM209BQ5JX69 171 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 DNTTIP2Q5QJE6 756 aaKnown RBP5.61□□□□□ -1.51
SMC4-205ENST00000465563 FNBP1LQ5T0N5 605 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 FAM83HQ6ZRV2 1179 aaPredicted RBP5.61□□□□□ -1.51
SMC4-205ENST00000465563 TRABD2AQ86V40 505 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 CAMK1DQ8IU85 385 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 CLEC18CQ8NCF0 446 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 NR4A3Q92570 626 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 REXO5Q96IC2 774 aaKnown RBP5.61□□□□□ -1.51
SMC4-205ENST00000465563 WDR77Q9BQA1 342 aaPredicted RBP5.61□□□□□ -1.51
SMC4-205ENST00000465563 CATSPERBQ9H7T0 1116 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 PLSCR4Q9NRQ2 329 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 SLC12A4Q9UP95 1085 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 PCDHGB1Q9Y5G3 927 aa5.61□□□□□ -1.51
SMC4-205ENST00000465563 CYP3A7-CYP3A51PA0A087WV96 503 aa5.6□□□□□ -1.51
SMC4-205ENST00000465563 CYSRT1A8MQ03 144 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms