RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 KDM1BQ8NB78 822 aa26.7■■□□□ 1.86
U2AF1-206ENST00000464750 OR2I1PQ8NGU4 316 aa26.7■■□□□ 1.86
U2AF1-206ENST00000464750 CNTNAP3BQ96NU0 1288 aa26.7■■□□□ 1.86
U2AF1-206ENST00000464750 CNTNAP3Q9BZ76 1288 aa26.7■■□□□ 1.86
U2AF1-206ENST00000464750 SRPRAP08240 638 aaKnown RBP26.69■■□□□ 1.86
U2AF1-206ENST00000464750 ACSL1P33121 698 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 GGCXP38435 758 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 GABRB2P47870 512 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 KLK7P49862 253 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 RNASE9P60153 205 aaKnown RBP26.69■■□□□ 1.86
U2AF1-206ENST00000464750 ECT2LQ008S8 904 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 CENPCQ03188 943 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 ZNF252P-AS1Q0IIN9 211 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 MTA1Q13330 715 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 FAM102AQ5T9C2 384 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-206ENST00000464750 RNF219Q5W0B1 726 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-206ENST00000464750 SASS6Q6UVJ0 657 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 ERICH1Q86X53 443 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 DEFB124Q8NES8 71 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 EPS8L1Q8TE68 723 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 C18orf8Q96DM3 657 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 RPRD1AQ96P16 312 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-206ENST00000464750 PCED1AQ9H1Q7 454 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 RSPH9Q9H1X1 276 aaPredicted RBP26.69■■□□□ 1.86
U2AF1-206ENST00000464750 ANO10Q9NW15 660 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 FANCLQ9NW38 375 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 RRN3Q9NYV6 651 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.69■■□□□ 1.86
U2AF1-206ENST00000464750 STAP1Q9ULZ2 295 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 HS3ST4Q9Y661 456 aa26.69■■□□□ 1.86
U2AF1-206ENST00000464750 ITIH6Q6UXX5 1313 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 A0A1B0GTW7 788 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 TTC34A8MYJ7 566 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 OPHN1O60890 802 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 LSM8O95777 96 aaKnown RBP26.68■■□□□ 1.86
U2AF1-206ENST00000464750 PDGFRAP16234 1089 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 SCNN1AP37088 669 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 NUMBP49757 651 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 SULT1E1P49888 294 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 SLC12A1Q13621 1099 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 AUHQ13825 339 aaKnown RBP26.68■■□□□ 1.86
U2AF1-206ENST00000464750 FKBP15Q5T1M5 1219 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 XYLT1Q86Y38 959 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 IGSF8Q969P0 613 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 NPY6RQ99463 290 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 ADAM33Q9BZ11 813 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 BTBD1Q9H0C5 482 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 C6orf106Q9H6K1 298 aaPredicted RBP26.68■■□□□ 1.86
U2AF1-206ENST00000464750 PIGVQ9NUD9 493 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 VANGL2Q9ULK5 521 aa26.68■■□□□ 1.86
U2AF1-206ENST00000464750 PAGE1O75459 146 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 MMEP08473 750 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 CEACAM1P13688 526 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 TFE3P19532 575 aaPredicted RBP26.67■■□□□ 1.86
U2AF1-206ENST00000464750 IRAK1P51617 712 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 GRIK2Q13002 908 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 ARID5BQ14865 1188 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 STX1AQ16623 288 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 CXorf57Q6NSI4 855 aaKnown RBP26.67■■□□□ 1.86
U2AF1-206ENST00000464750 MSANTD4Q8NCY6 345 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 SNX19Q92543 992 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 FAM207AQ9NSI2 230 aaPredicted RBP26.67■■□□□ 1.86
U2AF1-206ENST00000464750 EIF2B4Q9UI10 523 aaKnown RBP26.67■■□□□ 1.86
U2AF1-206ENST00000464750 ANGPTL2Q9UKU9 493 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 CHD8Q9HCK8 2581 aa26.67■■□□□ 1.86
U2AF1-206ENST00000464750 EDDM13A0A1B0GTR0 161 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 RNASEH1O60930 286 aaKnown RBP26.66■■□□□ 1.86
U2AF1-206ENST00000464750 GFPT2O94808 682 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 SEMA4FO95754 770 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 MZF1P28698 734 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-206ENST00000464750 STK19P49842 368 aaPredicted RBP26.66■■□□□ 1.86
U2AF1-206ENST00000464750 POLR2FP61218 127 aaKnown RBP26.66■■□□□ 1.86
U2AF1-206ENST00000464750 NOMO3P69849 1222 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 SEMA3BQ13214 749 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 C2CD6Q53TS8 623 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 NAA35Q5VZE5 725 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 SLC20A1Q8WUM9 679 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 RPL10LQ96L21 214 aaKnown RBP26.66■■□□□ 1.86
U2AF1-206ENST00000464750 PABPC3Q9H361 631 aaKnown RBP26.66■■□□□ 1.86
U2AF1-206ENST00000464750 SLC32A1Q9H598 525 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 SLCO3A1Q9UIG8 710 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 NOCTQ9UK39 431 aaKnown RBP26.66■■□□□ 1.86
U2AF1-206ENST00000464750 PCNX2A6NKB5 2137 aa26.66■■□□□ 1.86
U2AF1-206ENST00000464750 TARSL2A2RTX5 802 aaKnown RBP26.65■■□□□ 1.86
U2AF1-206ENST00000464750 GOLGA8SH3BPF8 625 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 EPHB6O15197 1021 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 BCAT2O15382 392 aaPredicted RBP26.65■■□□□ 1.86
U2AF1-206ENST00000464750 OXCT1P55809 520 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 MYL5Q02045 173 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 DEUP1Q05D60 604 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 BRMS1LQ5PSV4 323 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 C9orf64Q5T6V5 341 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 ZNF677Q86XU0 584 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 CPA5Q8WXQ8 436 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 TBCBQ99426 244 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 TKTL2Q9H0I9 626 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 SIK2Q9H0K1 926 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 WDCPQ9H6R7 721 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 SGK2Q9HBY8 427 aa26.65■■□□□ 1.86
U2AF1-206ENST00000464750 NLRC4Q9NPP4 1024 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms