RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ADGRF4Q8IZF3 695 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 NANOGP1Q8N7R0 232 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 SPPL3Q8TCT6 385 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 PIMREGQ9BSJ6 248 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 SCNM1Q9BWG6 230 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 KIF17Q9P2E2 1029 aa6.61□□□□□ -1.35
PTCD3-205ENST00000464541 FAM90A20PA6NIJ5 464 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 E7EVH7 732 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 ADAM10O14672 748 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 IRAK2O43187 625 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 TLX3O43711 291 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-205ENST00000464541 NBNO60934 754 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 TMEM191BP0C7N4 346 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 DHRS4L1P0CG22 281 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 ADD2P35612 726 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 STAT1P42224 750 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 OAZ1P54368 228 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 LAMB3Q13751 1172 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 PGM5Q15124 567 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 RBMS2Q15434 407 aaKnown RBP6.6□□□□□ -1.35
PTCD3-205ENST00000464541 C10orf76Q5T2E6 689 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 ANO1Q5XXA6 986 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 RTL10Q7L3V2 364 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 RRAGAQ7L523 313 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 MDGA2Q7Z553 956 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 SLC44A5Q8NCS7 719 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 OSBPL5Q9H0X9 879 aaPredicted RBP6.6□□□□□ -1.35
PTCD3-205ENST00000464541 TNFSF13BQ9Y275 285 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 DTX4Q9Y2E6 619 aa6.6□□□□□ -1.35
PTCD3-205ENST00000464541 TRBV5-3A0A0A0MS03 114 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 KIR2DS5A0A0G2JLQ3 304 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 DPPA5A6NC42 116 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 KCNJ18B7U540 433 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 KIR2DS3K7RE56 304 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 LCKP06239 509 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 PEPDP12955 493 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 HOXB9P17482 250 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-205ENST00000464541 AARSP49588 968 aaKnown RBP eCLIP6.59□□□□□ -1.35
PTCD3-205ENST00000464541 ARL4CP56559 192 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 DLGAP5Q15398 846 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 ADCK5Q3MIX3 580 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 KIAA1755Q5JYT7 1200 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 PIP4P1Q86T03 277 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 FSIP1Q8NA03 581 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 FAM167BQ9BTA0 163 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 SLC22A11Q9NSA0 550 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 KCND3Q9UK17 655 aa6.59□□□□□ -1.35
PTCD3-205ENST00000464541 MORC2Q9Y6X9 1032 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-205ENST00000464541 TTBK1Q5TCY1 1321 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-205ENST00000464541 GRM8O00222 908 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 SOCS2O14508 198 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 UGDHO60701 494 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 EIF3JO75822 258 aaKnown RBP6.58□□□□□ -1.36
PTCD3-205ENST00000464541 TK1P04183 234 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 PRKAA2P54646 552 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 EFR3AQ14156 821 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 MIDNQ504T8 468 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 ANKS1BQ7Z6G8 1248 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTCD3-205ENST00000464541 ARFGAP1Q8N6T3 406 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 ARRDC3Q96B67 414 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 RASSF1Q9NS23 344 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.58□□□□□ -1.36
PTCD3-205ENST00000464541 ELOVL5Q9NYP7 299 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 PKP3Q9Y446 797 aa6.58□□□□□ -1.36
PTCD3-205ENST00000464541 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-205ENST00000464541 SETD1BQ9UPS6 1966 aaKnown RBP6.58□□□□□ -1.36
PTCD3-205ENST00000464541 CYP21A2P08686 494 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 PRF1P14222 555 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 CHN1P15882 459 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 HALP42357 657 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 ACTR2P61160 394 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 CDK18Q07002 472 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 MTX1Q13505 466 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 ALKBH1Q13686 389 aaKnown RBP6.57□□□□□ -1.36
PTCD3-205ENST00000464541 RABEP1Q15276 862 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 TTC39AQ5SRH9 613 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 VWA5B1Q5TIE3 1220 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 CYB5R4Q7L1T6 521 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 TMEM200AQ86VY9 491 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 KLBQ86Z14 1044 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 GOLGA1Q92805 767 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 TRIM63Q969Q1 353 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 KTI12Q96EK9 354 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-205ENST00000464541 HMCESQ96FZ2 354 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 ADAD1Q96M93 576 aaKnown RBP6.57□□□□□ -1.36
PTCD3-205ENST00000464541 WDR83Q9BRX9 315 aaKnown RBP6.57□□□□□ -1.36
PTCD3-205ENST00000464541 SPRTNQ9H040 489 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-205ENST00000464541 RNF7Q9UBF6 113 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 AFG3L2Q9Y4W6 797 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 HS3ST3B1Q9Y662 390 aa6.57□□□□□ -1.36
PTCD3-205ENST00000464541 LY6G6EA0A0G2JKS1 128 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 NFATC1O95644 943 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 WNT1P04628 370 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 PRPH2P23942 346 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 ME1P48163 572 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 RBM5P52756 815 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTCD3-205ENST00000464541 CUL4BQ13620 913 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 SYT13Q7L8C5 426 aa6.56□□□□□ -1.36
PTCD3-205ENST00000464541 MOGAT3Q86VF5 341 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms