RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 MSTNO14793 375 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 VILLO15195 856 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 DHX15O43143 795 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 PRPSAP2O60256 369 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 TADA2AO75478 443 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 BAIAP3O94812 1187 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 BMP10O95393 424 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CRTAMO95727 393 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ASS1P00966 412 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CD48P09326 243 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SMIM18P0DKX4 95 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 HSPA8P11142 646 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ITGB5P18084 799 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ITGAXP20702 1163 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ME2P23368 584 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CCND2P30279 289 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 NAMPTP43490 491 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 NR2C2P49116 596 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 IDH3AP50213 366 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 RBM5P52756 815 aaKnown RBP eCLIP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 EFNA5P52803 228 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SEC13P55735 322 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 PSMC1P62191 440 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 YWHAZP63104 245 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 DYNLT1P63172 113 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 DLG1Q12959 904 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 MSLNQ13421 630 aaPredicted RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ART3Q13508 389 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 APOFQ13790 326 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SEPT6Q14141 434 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 FLOT2Q14254 428 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 FRG1Q14331 258 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 STILQ15468 1287 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 DUOXA2Q1HG44 320 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 NADK2Q4G0N4 442 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 KCTD21Q4G0X4 260 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CRTC2Q53ET0 693 aaPredicted RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SYCP2LQ5T4T6 812 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ANKRD22Q5VYY1 191 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 TDRD10Q5VZ19 366 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 LPCAT4Q643R3 524 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 OLFML2BQ68BL8 750 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 MBLAC2Q68D91 279 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 KRT80Q6KB66 452 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 TSHZ1Q6ZSZ6 1077 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 FAM43BQ6ZT52 329 aaPredicted RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 RFX8Q6ZV50 586 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF410Q86VK4 478 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 TTC30AQ86WT1 665 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SIAH1Q8IUQ4 282 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 COLGALT2Q8IYK4 626 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 UNC5BQ8IZJ1 945 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 PGAM4Q8N0Y7 254 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 BBS5Q8N3I7 341 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CNTD1Q8N815 330 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 GLIS1Q8NBF1 620 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 TSPAN14Q8NG11 270 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CEP70Q8NHQ1 597 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF420Q8TAQ5 688 aaPredicted RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 AFG1LQ8WV93 481 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 GAB3Q8WWW8 586 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC7A3Q8WY07 619 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 BORCS5Q969J3 196 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 PBXIP1Q96AQ6 731 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 HSH2DQ96JZ2 352 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 FAR2Q96K12 515 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SPOCK3Q9BQ16 436 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CNPY3Q9BT09 278 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 PI4K2AQ9BTU6 479 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 MSTO1Q9BUK6 570 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 CALN1Q9BXU9 219 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 OSBPL6Q9BZF3 934 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC13A1Q9BZW2 595 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SDCBP2Q9H190 292 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 BCAS3Q9H6U6 928 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 USP29Q9HBJ7 922 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 POPDC2Q9HBU9 364 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 EIF2B3Q9NR50 452 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 TOPORSQ9NS56 1045 aaPredicted RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 PNPLA3Q9NST1 481 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ETNK2Q9NVF9 386 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 KLHL11Q9NVR0 708 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 NSMCE4AQ9NXX6 385 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 UTP6Q9NYH9 597 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 IGSF9Q9P2J2 1179 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SEPT3Q9UH03 358 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 ADAMTS6Q9UKP5 1117 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 BLOC1S6Q9UL45 172 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC8A2Q9UPR5 921 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 AP4B1Q9Y6B7 739 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 LY75O60449 1722 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 SIP14410 1827 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 A0A1B0GVG6 124 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 K7ERI5 159 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 DNAJA2O60884 412 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 LRCH4O75427 683 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 E2F6O75461 281 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 GCATO75600 419 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 USP1O94782 785 aa7.36□□□□□ -1.23
CLSTN1-204ENST00000464286 ALDH1A2O94788 518 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms