RNA–Protein interactions for RNA: ENST00000463837.5

CCDC88B-204, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 5,235 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-204ENST00000463837 RPRD1AQ96P16 312 aaPredicted RBP19.38■□□□□ 0.69
CCDC88B-204ENST00000463837 SEMA6AQ9H2E6 1030 aa19.38■□□□□ 0.69
CCDC88B-204ENST00000463837 MROH8Q9H579 483 aa19.38■□□□□ 0.69
CCDC88B-204ENST00000463837 ADAM30Q9UKF2 790 aa19.38■□□□□ 0.69
CCDC88B-204ENST00000463837 CCDC154A6NI56 674 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 F8W810 466 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 PSMB9P28065 219 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 FBXO47Q5MNV8 452 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 KAT5Q92993 513 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 PNMA8BQ9ULN7 279 aaPredicted RBP19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 PCDHB7Q9Y5E2 793 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 hCG_1818297A0A087WSY0 165 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 A0A0A0MRY4 1105 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 TRIM38O00635 465 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 MAPK10P53779 464 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 MGAT5BQ3V5L5 792 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 C12orf56Q8IXR9 622 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 ABHD8Q96I13 439 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 SPATA13Q96N96 652 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 GORASP1Q9BQQ3 440 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 SPATA16Q9BXB7 569 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 KLHL3Q9UH77 587 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 C17orf102A2RUQ5 167 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 PEX1O43933 1283 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 FAM20BO75063 409 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 DDR2Q16832 855 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 TMC5Q6UXY8 1006 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 ATG16L2Q8NAA4 619 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 ANKRD26Q9UPS8 1709 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 F5H5T6 163 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 AGPSO00116 658 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 ACKR2O00590 384 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 GABRB2P47870 512 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 YWHAZP63104 245 aaKnown RBP19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 CNTN1Q12860 1018 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 ZNF177Q13360 481 aaPredicted RBP19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 KCTD19Q17RG1 926 aaPredicted RBP19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 OR8H2Q8N162 312 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 COLEC11Q9BWP8 271 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 VTA1Q9NP79 307 aa19.37■□□□□ 0.69
CCDC88B-204ENST00000463837 NID2Q14112 1375 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PSMD12O00232 456 aaPredicted RBP19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ZNF682O95780 498 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 AMPD1P23109 780 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 TKTL1P51854 596 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 NCF4Q15080 339 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ADCK2Q7Z695 626 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 TLCD1Q96CP7 247 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PHF21BQ96EK2 531 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 IDI2Q9BXS1 227 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 CLPBQ9H078 707 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 IMPDH2P12268 514 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PIK3R1P27986 724 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ZNF143P52747 638 aaPredicted RBP19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PKNOX1P55347 436 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 TRIP4Q15650 581 aaPredicted RBP19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 MAPK11Q15759 364 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ANKS6Q68DC2 871 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ALG3Q92685 438 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 SEMA4DQ92854 862 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ROGDIQ9GZN7 287 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 IL22Q9GZX6 179 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 KLK14Q9P0G3 267 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 CD3EAPO15446 510 aaKnown RBP19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 FLT3P36888 993 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 FBXW4P57775 412 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 NR6A1Q15406 480 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 SDE2Q6IQ49 451 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 CYP4Z1Q86W10 505 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PGBD3Q8N328 593 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 FBXO39Q8N4B4 442 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 OR56A4Q8NGH8 313 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 TBL1YQ9BQ87 522 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 OSBPL11Q9BXB4 747 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 MTFR1LQ9H019 292 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 POMKQ9H5K3 350 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PARVBQ9HBI1 364 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 RBM22Q9NW64 420 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 SPASTQ9UBP0 616 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 MORF4L1Q9UBU8 362 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ANAPC2Q9UJX6 822 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 TAL1P17542 331 aaPredicted RBP19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 C1DQ13901 141 aaKnown RBP19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ARHGAP15Q53QZ3 475 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PLEKHH3Q7Z736 793 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 FAM13CQ8NE31 585 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 MBOAT7Q96N66 472 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 TTYH3Q9C0H2 523 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 PPP2R3BQ9Y5P8 575 aa19.36■□□□□ 0.69
CCDC88B-204ENST00000463837 ADRB2P07550 413 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 LRPAP1P30533 357 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 POU6F1Q14863 301 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 ACTRT2Q8TDY3 377 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 PRRG3Q9BZD7 231 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 DPY30Q9C005 99 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 CEP44Q9C0F1 390 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 PNPLA3Q9NST1 481 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 ITM2BQ9Y287 266 aa19.35■□□□□ 0.69
CCDC88B-204ENST00000463837 MGRN1O60291 552 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms