RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 P2RY11Q96G91 374 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 SNRNP25Q9BV90 132 aaKnown RBP20.38■□□□□ 0.85
COL9A3-204ENST00000463487 KCNH6Q9H252 994 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 CATSPERBQ9H7T0 1116 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 ELOVL2Q9NXB9 296 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 CLEC4EQ9ULY5 219 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 PLA2G4CQ9UP65 541 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 HCN4Q9Y3Q4 1203 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 SNX10Q9Y5X0 201 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 FGF10O15520 208 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-204ENST00000463487 CREB3O43889 395 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 LRIG2O94898 1065 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 ASLP04424 464 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 RHOCP08134 193 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 RHOQP17081 205 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 EPHB2P29323 1055 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 ETFBP38117 255 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 SLC1A1P43005 524 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 KIR2DL1P43626 348 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-204ENST00000463487 CXCL12P48061 93 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 VAV2P52735 878 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 TPI1P60174 286 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 MESP2Q0VG99 397 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 LMAN2Q12907 356 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 CHPFQ8IZ52 775 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 ARFGAP1Q8N6T3 406 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 TEKT4Q8WW24 435 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 EZH1Q92800 747 aaPredicted RBP20.37■□□□□ 0.85
COL9A3-204ENST00000463487 SLC8A2Q9UPR5 921 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 TBC1D30Q9Y2I9 924 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 KMT2EQ8IZD2 1858 aa20.37■□□□□ 0.85
COL9A3-204ENST00000463487 TMEM110-MUSTN1A8MSY1 372 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 PRRT4C9JH25 899 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 DAPK3O43293 454 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 GALR2O43603 387 aaPredicted RBP20.36■□□□□ 0.85
COL9A3-204ENST00000463487 PTMAP06454 111 aaKnown RBP20.36■□□□□ 0.85
COL9A3-204ENST00000463487 KRT7P08729 469 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 CD70P32970 193 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 MAPKAPK2P49137 400 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 HADHBP55084 474 aaKnown RBP20.36■□□□□ 0.85
COL9A3-204ENST00000463487 ST8SIA6P61647 398 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 SULT2A1Q06520 285 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 KIF5AQ12840 1032 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 MANEALQ5VSG8 457 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 RNF219Q5W0B1 726 aaPredicted RBP20.36■□□□□ 0.85
COL9A3-204ENST00000463487 MBLAC2Q68D91 279 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 ZNF783Q6ZMS7 281 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 SYT13Q7L8C5 426 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 TFAP2DQ7Z6R9 452 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 KIAA0907Q7Z7F0 614 aaPredicted RBP20.36■□□□□ 0.85
COL9A3-204ENST00000463487 LRRC8AQ8IWT6 810 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 WFDC5Q8TCV5 224 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 PEBP4Q96S96 227 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 MUC3BQ9H195 1237 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 IRF2BPLQ9H1B7 796 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 ZWILCHQ9H900 591 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 MPP6Q9NZW5 540 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 MMP17Q9ULZ9 603 aa20.36■□□□□ 0.85
COL9A3-204ENST00000463487 H3BRJ5 948 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 EEF2KO00418 725 aaKnown RBP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 ZBTB24O43167 697 aaPredicted RBP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 CNTN5O94779 1100 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 KLF8O95600 359 aaPredicted RBP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 DLDP09622 509 aaKnown RBP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 HNRNPLP14866 589 aaKnown RBP eCLIP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 NTSR1P30989 418 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 NNMTP40261 264 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 ARL4AP40617 200 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 NAP1L1P55209 391 aaKnown RBP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 IFI16Q16666 785 aaKnown RBP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 FUT11Q495W5 492 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 ALFQ53S48 1182 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 FSCBQ5H9T9 825 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 PITRM1Q5JRX3 1037 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 ALLCQ8N6M5 410 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 ACRBPQ8NEB7 543 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 HSPH1Q92598 858 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.35■□□□□ 0.85
COL9A3-204ENST00000463487 TMEM248Q9NWD8 314 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 GPATCH2LQ9NWQ4 482 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 FBXO4Q9UKT5 387 aa20.35■□□□□ 0.85
COL9A3-204ENST00000463487 BTNL10A8MVZ5 291 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 FAM72CH0Y354 149 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 PAPSS2O95340 614 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-204ENST00000463487 HOXC13P31276 330 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 CSKP41240 450 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 PLK1P53350 603 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 SLC25A11Q02978 314 aaKnown RBP20.34■□□□□ 0.85
COL9A3-204ENST00000463487 KRT81Q14533 505 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 SMTNL2Q2TAL5 461 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 PLEKHG6Q3KR16 790 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 ODF2Q5BJF6 829 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 PPP6R3Q5H9R7 873 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-204ENST00000463487 ZFYVE27Q5T4F4 411 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 FAM72AQ5TYM5 149 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 EGFLAMQ63HQ2 1017 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 FAM72DQ6L9T8 149 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 CXorf57Q6NSI4 855 aaKnown RBP20.34■□□□□ 0.85
COL9A3-204ENST00000463487 ADIPOR2Q86V24 386 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 FAM72BQ86X60 149 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms