RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 PANX3Q96QZ0 392 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 SPATS2LQ9NUQ6 558 aaKnown RBP13.08□□□□□ -0.32
NUP58-206ENST00000463407 OR6C75A6NL08 312 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 AMD1P17707 334 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 SH3RF1Q7Z6J0 888 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 NAT16Q8N8M0 369 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 HJURPQ8NCD3 748 aaPredicted RBP13.08□□□□□ -0.32
NUP58-206ENST00000463407 FBXO25Q8TCJ0 367 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 PHF21AQ96BD5 680 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 ZYG11BQ9C0D3 744 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 AVENQ9NQS1 362 aaPredicted RBP13.08□□□□□ -0.32
NUP58-206ENST00000463407 VPS51Q9UID3 782 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 GNRH1P01148 92 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 ABHD15Q6UXT9 468 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 PIGZQ86VD9 579 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 BRD9Q9H8M2 597 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 TAS2R13Q9NYV9 303 aa13.08□□□□□ -0.32
NUP58-206ENST00000463407 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 A0A0G2JLL6 359 aaPredicted RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 CCT8L1PA6NM43 557 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 MEI4A8MW99 385 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 TYMPP19971 482 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 CCDC85BQ15834 202 aaPredicted RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 RAET1GQ6H3X3 334 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 PRRT2Q7Z6L0 340 aaPredicted RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 ANKRD52Q8NB46 1076 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 ETNPPLQ8TBG4 499 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 FMN2Q9NZ56 1722 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 VAPBO95292 243 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 ADH1CP00326 375 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 ARF4P18085 180 aaPredicted RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 C21orf59P57076 290 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 C9orf57Q5W0N0 161 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 EEF1DP3Q658K8 133 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 SLC24A5Q71RS6 500 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 FAM9CQ8IZT9 166 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 PHF21BQ96EK2 531 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 VPS50Q96JG6 964 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 PPP1R10Q96QC0 940 aaKnown RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 GANQ9H2C0 597 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 ZNHIT2Q9UHR6 403 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 PADI3Q9ULW8 664 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 SMAD3P84022 425 aaKnown RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 GPR158Q5T848 1215 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 ZNF470Q6ECI4 717 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 CENPLQ8N0S6 344 aaPredicted RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 GALNT4Q8N4A0 578 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 TOP6BLQ8N6T0 577 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 HSFY1Q96LI6 401 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 MRPL45Q9BRJ2 306 aaKnown RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 SOHLH2Q9NX45 425 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 SLC2A4P14672 509 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 CD86P42081 329 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 GPR1P46091 355 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 HLA-DQA1Q5Y7H0 255 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 FAM124AQ86V42 546 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 TDRD5Q8NAT2 981 aaKnown RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 SLC24A2Q9UI40 661 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 TARSP26639 723 aaKnown RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 CYP2C18P33260 490 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 GUCA1AP43080 201 aaPredicted RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
NUP58-206ENST00000463407 DUSP4Q13115 394 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 KAT5Q92993 513 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 TRPC4Q9UBN4 977 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 DNAJC16Q9Y2G8 782 aa13.07□□□□□ -0.32
NUP58-206ENST00000463407 SIGLEC16A6NMB1 481 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 DNALI1O14645 258 aaPredicted RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 GLI1P08151 1106 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 SMPD1P17405 629 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 IRAK1P51617 712 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 PFKPQ01813 784 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 STX5Q13190 355 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 TUSC3Q13454 348 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 CHPFQ8IZ52 775 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 TM6SF2Q9BZW4 377 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 CATSPERZQ9NTU4 200 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 UBXN8O00124 270 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 CA12O43570 354 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 ZBTB14O43829 449 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 CYP7B1O75881 506 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 PARNO95453 639 aaKnown RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 CPA3P15088 417 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 ELK3P41970 407 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 PRMT2P55345 433 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 SEL1L3Q68CR1 1132 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 PDPK2PQ6A1A2 396 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 VAT1Q99536 393 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 MLPHQ9BV36 600 aaPredicted RBP13.06□□□□□ -0.32
NUP58-206ENST00000463407 L2HGDHQ9H9P8 463 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 HEY2Q9UBP5 337 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 NEDD8-MDP1E9PL57 170 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 IFNL1Q8IU54 200 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 ATP13A3Q9H7F0 1226 aa13.06□□□□□ -0.32
NUP58-206ENST00000463407 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms