RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 MID1O15344 667 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 SIGLEC6O43699 453 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 SIN3BO75182 1162 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 ASS1P00966 412 aaKnown RBP8.03□□□□□ -1.12
SMC3-202ENST00000462899 CYBBP04839 570 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 MPOP05164 745 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 HMBSP08397 361 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 RALAP11233 206 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 PABPC1P11940 636 aaKnown RBP8.03□□□□□ -1.12
SMC3-202ENST00000462899 ADORA2BP29275 332 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 ADPRHP54922 357 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 SNRPFP62306 86 aaKnown RBP8.03□□□□□ -1.12
SMC3-202ENST00000462899 PPP2CBP62714 309 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 PPP2CAP67775 309 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 GABREP78334 506 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 ASIC1P78348 528 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 E2F1Q01094 437 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 ZNF211Q13398 564 aaPredicted RBP8.03□□□□□ -1.12
SMC3-202ENST00000462899 CST6Q15828 149 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 HNRNPA1L2Q32P51 320 aaKnown RBP8.03□□□□□ -1.12
SMC3-202ENST00000462899 ZACNQ401N2 412 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 MPPE1Q53F39 396 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 C9orf64Q5T6V5 341 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 MBLAC2Q68D91 279 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 CCDC73Q6ZRK6 1079 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 IQCHQ86VS3 1027 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 CCDC65Q8IXS2 484 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 LSMEM2Q8N112 164 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 SLC25A45Q8N413 288 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 AADATQ8N5Z0 425 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 EXD3Q8N9H8 876 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 MFSD2AQ8NA29 543 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 TMEM174Q8WUU8 243 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 JAKMIP2Q96AA8 810 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 TTC17Q96AE7 1141 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 SKA1Q96BD8 255 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 PRR11Q96HE9 360 aaPredicted RBP8.03□□□□□ -1.12
SMC3-202ENST00000462899 NEUROG2Q9H2A3 272 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 POLR1BQ9H9Y6 1135 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 KBTBD4Q9NVX7 518 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 FBXL12Q9NXK8 326 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 MARCH2Q9P0N8 246 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 TPX2Q9ULW0 747 aaKnown RBP8.03□□□□□ -1.12
SMC3-202ENST00000462899 PLA2G4CQ9UP65 541 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 CLIC4Q9Y696 253 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 CENPEQ02224 2701 aa8.03□□□□□ -1.12
SMC3-202ENST00000462899 TRPM6Q9BX84 2022 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 A0A1B0GVM2 712 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 LRRC72A6NJI9 287 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 CDRT15L2A8MXV6 281 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 H3BQV1 296 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 KLK10O43240 276 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 SIAH2O43255 324 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 STX6O43752 255 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 OPA1O60313 960 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 LATS1O95835 1130 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 CKMT1AP12532 417 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 CD70P32970 193 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 DRD3P35462 400 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 CYP2J2P51589 502 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 AP3M2P53677 418 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 ZNF445P59923 1031 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 ARID5AQ03989 594 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 LINC00303Q3SY05 128 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 C1orf220Q5T0J3 134 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 MPP7Q5T2T1 576 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 KIAA1614Q5VZ46 1190 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 PM20D1Q6GTS8 502 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 SPOPLQ6IQ16 392 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 NAPEPLDQ6IQ20 393 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 STXBP4Q6ZWJ1 553 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 BPHLQ86WA6 291 aaPredicted RBP8.02□□□□□ -1.13
SMC3-202ENST00000462899 KDM1BQ8NB78 822 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 OR4C6Q8NH72 309 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 CYFIP2Q96F07 1278 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 VCPIP1Q96JH7 1222 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 SERAC1Q96JX3 654 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 FAM129BQ96TA1 746 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 ARID3AQ99856 593 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.02□□□□□ -1.13
SMC3-202ENST00000462899 DUSP16Q9BY84 665 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 TNMDQ9H2S6 317 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 AASDHPPTQ9NRN7 309 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 STARD5Q9NSY2 213 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 SUN2Q9UH99 717 aa8.02□□□□□ -1.13
SMC3-202ENST00000462899 INTS6Q9UL03 887 aaKnown RBP8.02□□□□□ -1.13
SMC3-202ENST00000462899 CRYBG3Q68DQ2 2970 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 SLC12A8A0AV02 714 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 CLEC18AA5D8T8 446 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 FAM47DPA6NHR8 397 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 LCE2BO14633 110 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 EFSO43281 561 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 USP12O75317 370 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 CSO75390 466 aaKnown RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 IGLV3-27P01718 113 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 NTRK1P04629 796 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 ATP5BP06576 529 aaKnown RBP8.01□□□□□ -1.13
SMC3-202ENST00000462899 GP1BAP07359 652 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 ITGB6P18564 788 aa8.01□□□□□ -1.13
SMC3-202ENST00000462899 STAT6P42226 847 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms