RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CHID1Q9BWS9 393 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 HPS4Q9NQG7 708 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 CASZ1Q86V15 1759 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 EME2A4GXA9 379 aaPredicted RBP16.12■□□□□ 0.17
SMC4-204ENST00000462787 TBX10O75333 385 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 WBP4O75554 376 aaKnown RBP16.12■□□□□ 0.17
SMC4-204ENST00000462787 F9P00740 461 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 PGK2P07205 417 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 CRHR1P34998 444 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 GRIK1P39086 918 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 ACTR3P61158 418 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 KLF10Q13118 480 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 ORC1Q13415 861 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 FAM120BQ96EK7 910 aaKnown RBP16.12■□□□□ 0.17
SMC4-204ENST00000462787 DNAJC28Q9NX36 388 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 SAE1Q9UBE0 346 aaPredicted RBP16.12■□□□□ 0.17
SMC4-204ENST00000462787 TRMT6Q9UJA5 497 aaKnown RBP16.12■□□□□ 0.17
SMC4-204ENST00000462787 COG5Q9UP83 839 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 CCDC154A6NI56 674 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 PEX2P28328 305 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 SV2CQ496J9 727 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 METTL21CQ5VZV1 264 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 AMIGO2Q86SJ2 522 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 ZDHHC17Q8IUH5 632 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 POC5Q8NA72 575 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 APOL2Q9BQE5 337 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 PLA2G4CQ9UP65 541 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 A0A087X1B8 175 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 TPD52L2O43399 206 aaKnown RBP16.12■□□□□ 0.17
SMC4-204ENST00000462787 CAPN1P07384 714 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 FGRP09769 529 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 NEK3P51956 506 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 SLC18A1P54219 525 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 TAS2R40P59535 323 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 PTP4A2Q12974 167 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 ATP13A4Q4VNC1 1196 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 KCNT2Q6UVM3 1135 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 DPP3Q9NY33 737 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 AP3M1Q9Y2T2 418 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 TGFB1I1O43294 461 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 ATG7O95352 703 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 CREB1P16220 341 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 NAGLUP54802 743 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PPIL2Q13356 520 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 TIGD7Q6NT04 549 aaPredicted RBP16.11■□□□□ 0.17
SMC4-204ENST00000462787 CYP2W1Q8TAV3 490 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 FIG4Q92562 907 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 HPS1Q92902 700 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 DCPSQ96C86 337 aaKnown RBP16.11■□□□□ 0.17
SMC4-204ENST00000462787 GIN1Q9NXP7 522 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 ADAM30Q9UKF2 790 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 TRHDEQ9UKU6 1024 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 H0YGN5 161 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 LSM1O15116 133 aaKnown RBP16.11■□□□□ 0.17
SMC4-204ENST00000462787 APBA3O96018 575 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 NCAM1P13591 858 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 BCAT1P54687 386 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PLIN5Q00G26 463 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PRKD2Q9BZL6 878 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 POMKQ9H5K3 350 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 LATS2Q9NRM7 1088 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PLK2Q9NYY3 685 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 FETUBQ9UGM5 382 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 NFS1Q9Y697 457 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 TCRBV7S2A1N4TA0A589 114 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 HSMCR30P0CW71 290 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 CHRM3P20309 590 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PNPLA4P41247 253 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 AQP4P55087 323 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 TIMM50Q3ZCQ8 353 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 SPOUT1Q5T280 376 aaKnown RBP16.11■□□□□ 0.17
SMC4-204ENST00000462787 NIPA1Q7RTP0 329 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 ZNF276Q8N554 614 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 ENDOVQ8N8Q3 282 aaKnown RBP16.11■□□□□ 0.17
SMC4-204ENST00000462787 SNX31Q8N9S9 440 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PHF21BQ96EK2 531 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PLEKHA8Q96JA3 519 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 NR2E1Q9Y466 385 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 SNTNA6NMZ2 147 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 CD3EAPO15446 510 aaKnown RBP16.11■□□□□ 0.17
SMC4-204ENST00000462787 MTA2O94776 668 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 HMGCRP04035 888 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 AMPD1P23109 780 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 MAPK1P28482 360 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 PDZK1Q5T2W1 519 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 AKAP14Q86UN6 197 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 C17orf50Q8WW18 174 aa16.11■□□□□ 0.17
SMC4-204ENST00000462787 ANKRD63C9JTQ0 380 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 TSC22D2O75157 780 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 LYPLA1O75608 230 aaPredicted RBP16.1■□□□□ 0.17
SMC4-204ENST00000462787 ZNF682O95780 498 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 JCHAINP01591 159 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 IMPDH2P12268 514 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 GTF2BQ00403 316 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 SGO1Q5FBB7 561 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 ASIC4Q96FT7 647 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 PCDHB18PQ96TA0 734 aa16.1■□□□□ 0.17
SMC4-204ENST00000462787 TJP2Q9UDY2 1190 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms