RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.34■□□□□ 0.21
ERCC3-206ENST00000462306 TPSD1Q9BZJ3 242 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 TMEM245Q9H330 911 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 CNOT8Q9UFF9 292 aaKnown RBP16.34■□□□□ 0.21
ERCC3-206ENST00000462306 NENFQ9UMX5 172 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 EML5Q05BV3 1969 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 TMEM191CA6NGB0 347 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 E9PAM4 449 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 GFRA3O60609 400 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 MFAP3LO75121 409 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 CLDN11O75508 207 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 RPP40O75818 363 aaKnown RBP16.33■□□□□ 0.2
ERCC3-206ENST00000462306 ATP5BP06576 529 aaKnown RBP16.33■□□□□ 0.2
ERCC3-206ENST00000462306 MYBL1P10243 752 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 PRKCHP24723 683 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 CSKP41240 450 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 PLK1P53350 603 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 CDH4P55283 916 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 TBX2Q13207 712 aaPredicted RBP16.33■□□□□ 0.2
ERCC3-206ENST00000462306 SLC12A1Q13621 1099 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 SIM2Q14190 667 aaPredicted RBP16.33■□□□□ 0.2
ERCC3-206ENST00000462306 PLEKHG6Q3KR16 790 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 ARL13BQ3SXY8 428 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 LRRC31Q6UY01 552 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 APCDD1Q8J025 514 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 CCDC185Q8N715 623 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 OR52K2Q8NGK3 314 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 NTAN1Q96AB6 310 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 ZNF653Q96CK0 615 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 ERLEC1Q96DZ1 483 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 ALG14Q96F25 216 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 TRIM11Q96F44 468 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 MYO19Q96H55 970 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 MAGEB5Q9BZ81 275 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 TRIM7Q9C029 511 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 OSBPL2Q9H1P3 480 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 SMG5Q9UPR3 1016 aaKnown RBP16.33■□□□□ 0.2
ERCC3-206ENST00000462306 TBC1D30Q9Y2I9 924 aa16.33■□□□□ 0.2
ERCC3-206ENST00000462306 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 MZF1P28698 734 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 EIF4A3P38919 411 aaKnown RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 CTSOP43234 321 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 ADKP55263 362 aaKnown RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 NRG1Q02297 640 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 ZNF252P-AS1Q0IIN9 211 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 SCAPQ12770 1279 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 MANEALQ5VSG8 457 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 ALKBH5Q6P6C2 394 aaKnown RBP16.32■□□□□ 0.2
ERCC3-206ENST00000462306 SERPINA13PQ6UXR4 307 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 TMC6Q7Z403 805 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 MRGPRX3Q96LB0 322 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 ABHD10Q9NUJ1 306 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 MPP6Q9NZW5 540 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 ZNF212Q9UDV6 495 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 OR12D3Q9UGF7 316 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 OR51B4Q9Y5P0 310 aa16.32■□□□□ 0.2
ERCC3-206ENST00000462306 OTOGLQ3ZCN5 2332 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 FAM72CH0Y354 149 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 DCLK1O15075 740 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 SRGAP2O75044 1071 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 MOCS3O95396 460 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 ASLP04424 464 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 EPHX1P07099 455 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 TPM1P09493 284 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 HLA-EP13747 358 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 NDUFV2P19404 249 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 OXCT1P55809 520 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
ERCC3-206ENST00000462306 STARD3Q14849 445 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 LPAL2Q16609 132 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 FNDC3BQ53EP0 1204 aaKnown RBP16.31■□□□□ 0.2
ERCC3-206ENST00000462306 USP39Q53GS9 565 aaKnown RBP16.31■□□□□ 0.2
ERCC3-206ENST00000462306 FAM72AQ5TYM5 149 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 FAM72DQ6L9T8 149 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 PRR23BQ6ZRT6 265 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 CEP68Q76N32 757 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 FAM72BQ86X60 149 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 ARFGAP1Q8N6T3 406 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 FNIP1Q8TF40 1166 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 MRGPRX1Q96LB2 322 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 FEM1AQ9BSK4 669 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 THAP2Q9H0W7 228 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 BCCIPQ9P287 314 aaKnown RBP eCLIP16.31■□□□□ 0.2
ERCC3-206ENST00000462306 MYO1AQ9UBC5 1043 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 PPARGC1AQ9UBK2 798 aaKnown RBP16.31■□□□□ 0.2
ERCC3-206ENST00000462306 ERVW-1Q9UQF0 538 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 INVSQ9Y283 1065 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 SCINQ9Y6U3 715 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 RIF1Q5UIP0 2472 aaKnown RBP16.31■□□□□ 0.2
ERCC3-206ENST00000462306 USP34Q70CQ2 3546 aa16.31■□□□□ 0.2
ERCC3-206ENST00000462306 CKAP5Q14008 2032 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 SSU72P8A0A1W2PR75 194 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 PSMA2P25787 234 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 P2RY2P41231 377 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 NUMBP49757 651 aa16.3■□□□□ 0.2
ERCC3-206ENST00000462306 ZNF75DP51815 510 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms