RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 C12orf50Q8NA57 414 aaPredicted RBP10.98□□□□□ -0.65
RTF1-202ENST00000462276 SPATA4Q8NEY3 305 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 IRF7Q92985 503 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 FATE1Q969F0 183 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 NKD2Q969F2 451 aaPredicted RBP10.98□□□□□ -0.65
RTF1-202ENST00000462276 MS4A14Q96JA4 679 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 CAPZA3Q96KX2 299 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 FAM83CQ9BQN1 747 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 SMG9Q9H0W8 520 aaKnown RBP10.98□□□□□ -0.65
RTF1-202ENST00000462276 SPHK2Q9NRA0 654 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 IGSF9Q9P2J2 1179 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 NEU3Q9UQ49 428 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 DRG1Q9Y295 367 aaKnown RBP10.98□□□□□ -0.65
RTF1-202ENST00000462276 TBC1D30Q9Y2I9 924 aa10.98□□□□□ -0.65
RTF1-202ENST00000462276 GOLGA6L7A0A1B0GV03 622 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 CFAP69A5D8W1 941 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 PPP1R12AO14974 1030 aaPredicted RBP10.97□□□□□ -0.65
RTF1-202ENST00000462276 MCF2LO15068 1137 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 HOXC11O43248 304 aaPredicted RBP10.97□□□□□ -0.65
RTF1-202ENST00000462276 RAMP2O60895 175 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 PENKP01210 267 aaPredicted RBP10.97□□□□□ -0.65
RTF1-202ENST00000462276 FCARP24071 287 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 OR1E1P30953 314 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 VIPR2P41587 438 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 GAD2Q05329 585 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 PREPLQ4J6C6 727 aaPredicted RBP10.97□□□□□ -0.65
RTF1-202ENST00000462276 TMCO4Q5TGY1 634 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 AFMIDQ63HM1 303 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 NCBP2-AS2Q69YL0 99 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 TANGO2Q6ICL3 276 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 AADACL2Q6P093 401 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 RFWD3Q6PCD5 774 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 POTEHQ6S545 545 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 MAATS1Q7Z4T9 603 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 ANKS1BQ7Z6G8 1248 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 PRELID2Q8N945 189 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 SLC35B2Q8TB61 432 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 ACTL9Q8TC94 416 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 GRK7Q8WTQ7 553 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 DDI1Q8WTU0 396 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 IGSF8Q969P0 613 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 WBP2Q969T9 261 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 MAGOHBQ96A72 148 aaKnown RBP10.97□□□□□ -0.65
RTF1-202ENST00000462276 TSGA13Q96PP4 275 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 TRMT61BQ9BVS5 477 aaKnown RBP10.97□□□□□ -0.65
RTF1-202ENST00000462276 MAGEB5Q9BZ81 275 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 MAGEH1Q9H213 219 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 TRPV5Q9NQA5 729 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 SNX10Q9Y5X0 201 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 BRWD1Q9NSI6 2320 aa10.97□□□□□ -0.65
RTF1-202ENST00000462276 ARHGAP42A6NI28 874 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 PDE2AO00408 941 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 LIASO43766 372 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 TBL1XO60907 577 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 PHF2O75151 1096 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 LUC7L3O95232 432 aaKnown RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 ITGAVP06756 1048 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 RPS24P62847 133 aaKnown RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 DYNLT1P63172 113 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 GALNT2Q10471 571 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 CDH18Q13634 790 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 HTR4Q13639 388 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 BYSLQ13895 437 aaKnown RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 DMC1Q14565 340 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 POLD3Q15054 466 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 NOMO1Q15155 1222 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 E2F5Q15329 346 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 DHCR24Q15392 516 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 SIX1Q15475 284 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 EML3Q32P44 896 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 GLE1Q53GS7 698 aaKnown RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 ALFQ53S48 1182 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 CCDC70Q6NSX1 233 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 VITQ6UXI7 678 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 SYDE1Q6ZW31 735 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 CPA6Q8N4T0 437 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 MAFAQ8NHW3 353 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 CCDC26Q8TAB7 109 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 FIBINQ8TAL6 211 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 CCHCR1Q8TD31 782 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 PPM1EQ8WY54 764 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 SLCO2A1Q92959 643 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 EXOC4Q96A65 974 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 PRICKLE1Q96MT3 831 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 OLFM3Q96PB7 478 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 LRRC3BQ96PB8 259 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 XPO6Q96QU8 1125 aaKnown RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 LINC00597Q9H2U6 94 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 HAUS2Q9NVX0 235 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 DTLQ9NZJ0 730 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 MPP6Q9NZW5 540 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 KIAA1522Q9P206 1035 aaPredicted RBP10.96□□□□□ -0.65
RTF1-202ENST00000462276 ZNF212Q9UDV6 495 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 PRKAG3Q9UGI9 489 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 CDH22Q9UJ99 828 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 HEY1Q9Y5J3 304 aa10.96□□□□□ -0.65
RTF1-202ENST00000462276 ZNF638Q14966 1978 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms