RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 C1orf228Q6PIY5 440 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 MFN1Q8IWA4 741 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 RHOT1Q8IXI2 618 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 CARNMT1Q8N4J0 409 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.61□□□□□ -0.55
SSBP1-202ENST00000461433 RAPGEF5Q92565 580 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 TBC1D31Q96DN5 1066 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 FOXQ1Q9C009 403 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 TBC1D17Q9HA65 648 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 LTB4R2Q9NPC1 389 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 NDFIP2Q9NV92 336 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 KLHL11Q9NVR0 708 aa11.61□□□□□ -0.55
SSBP1-202ENST00000461433 TMEM221A6NGB7 291 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 C3orf70A6NLC5 250 aaPredicted RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 WASH4PA8MWX3 477 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 PRRT4C9JH25 899 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 H0Y626 953 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 M0R296 226 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 EEF2KO00418 725 aaKnown RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 KAT7O95251 611 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 EGFP01133 1207 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 CHRNB1P11230 501 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 RHOQP17081 205 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 EPHB2P29323 1055 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 HTR7P34969 479 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 GJC1P36383 396 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 MARCKSL1P49006 195 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 LMAN2Q12907 356 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 CCINQ13939 588 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 DPYSQ14117 519 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 DPYSL3Q14195 570 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 IFI16Q16666 785 aaKnown RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 GEN1Q17RS7 908 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 CWF19L1Q69YN2 538 aaKnown RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 GRAMD4Q6IC98 578 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 RWDD4Q6NW29 188 aaKnown RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 RFX8Q6ZV50 586 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 ANKS1BQ7Z6G8 1248 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 TFAP2DQ7Z6R9 452 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 TERB1Q8NA31 727 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 KRT35Q92764 455 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 ALG14Q96F25 216 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 EPAS1Q99814 870 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 RETREG1Q9H6L5 497 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 ARHGEF4Q9NR80 690 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 ABCB8Q9NUT2 735 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 TMEM248Q9NWD8 314 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 INTS6Q9UL03 887 aaKnown RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 HCN2Q9UL51 889 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 NDRG2Q9UN36 371 aaKnown RBP11.6□□□□□ -0.55
SSBP1-202ENST00000461433 OR51B4Q9Y5P0 310 aa11.6□□□□□ -0.55
SSBP1-202ENST00000461433 NUP205Q92621 2012 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PSTPIP1O43586 416 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 TNNT1P13805 278 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 DRD1P21728 446 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 KDELR1P24390 212 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 MZF1P28698 734 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 CTNNA1P35221 906 aaKnown RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 GRIA2P42262 883 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PEX5P50542 639 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ZNF135P52742 658 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 CDH6P55285 790 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 TPI1P60174 286 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ZNF177Q13360 481 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ADIPOR2Q86V24 386 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 SUGP1Q8IWZ8 645 aaKnown RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 RTL3Q8N8U3 475 aaKnown RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 KCTD6Q8NC69 237 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 CSPG4P5Q96PW8 444 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 KLC2Q9H0B6 622 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 NOL6Q9H6R4 1146 aaKnown RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 C11orf16Q9NQ32 467 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 TRMT1Q9NXH9 659 aaKnown RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 GGA2Q9UJY4 613 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ATG2BQ96BY7 2078 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 A0A0D9SEW6 157 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 FAM170BA6NMN3 283 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ZSCAN12O43309 604 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PI15O43692 258 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 FTCDO95954 541 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 APODP05090 189 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PABPC1P11940 636 aaKnown RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 ERCC2P18074 760 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 AMPD1P23109 780 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 CTNNA2P26232 953 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 OR1E1P30953 314 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 CSKP41240 450 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PLK1P53350 603 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 GRSF1Q12849 480 aaKnown RBP eCLIP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 CDH18Q13634 790 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 UBXN2BQ14CS0 331 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 PDK2Q15119 407 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 FUT11Q495W5 492 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 EMC10Q5UCC4 262 aa11.59□□□□□ -0.55
SSBP1-202ENST00000461433 SETD3Q86TU7 594 aaPredicted RBP11.59□□□□□ -0.55
SSBP1-202ENST00000461433 CCDC105Q8IYK2 499 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms