RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ALOXE3Q9BYJ1 711 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 SYNPO2LQ9H987 977 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 PCDHB16Q9NRJ7 776 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 BEX4Q9NWD9 120 aaPredicted RBP3.22□□□□□ -1.89
HPS3-203ENST00000460822 ALKBH4Q9NXW9 302 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 SARDHQ9UL12 918 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 PCDHGB4Q9UN71 923 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 NOX1Q9Y5S8 564 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 RPGRIP1LQ68CZ1 1315 aa3.22□□□□□ -1.89
HPS3-203ENST00000460822 TMEM200CA6NKL6 621 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 MARCH11A6NNE9 402 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 TGFB1I1O43294 461 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 LPXNO60711 386 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 IL6RP08887 468 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 LYL1P12980 280 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 GLULP15104 373 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 DDX6P26196 483 aaKnown RBP eCLIP3.21□□□□□ -1.89
HPS3-203ENST00000460822 MCM5P33992 734 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 HADHAP40939 763 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 VAV2P52735 878 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 NLRP5P59047 1200 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 FAM189BP81408 668 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 MC1RQ01726 317 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 CDK18Q07002 472 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 NAA25Q14CX7 972 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 ERCC6LQ2NKX8 1250 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 SP5Q6BEB4 398 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 Q6ZPA2 131 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 FAM43BQ6ZT52 329 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 IKBIPQ70UQ0 350 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 RAB11FIP4Q86YS3 637 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 RPAP2Q8IXW5 612 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 TTC39CQ8N584 583 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 SRBD1Q8N5C6 995 aaKnown RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 B3GALNT2Q8NCR0 500 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 USP6NLQ92738 828 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 RSPRY1Q96DX4 576 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 RNFT2Q96EX2 444 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 LENG8Q96PV6 779 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 NR1H4Q96RI1 486 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 SLF1Q9BQI6 1058 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 CTDSP1Q9GZU7 261 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 RIOX1Q9H6W3 641 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 SYNCQ9H7C4 482 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 SEMA4BQ9NPR2 832 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 TRIM36Q9NQ86 728 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 NFKBIL1Q9UBC1 381 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 VPS4AQ9UN37 437 aa3.21□□□□□ -1.89
HPS3-203ENST00000460822 MAGED1Q9Y5V3 778 aaPredicted RBP3.21□□□□□ -1.89
HPS3-203ENST00000460822 KDM3AQ9Y4C1 1321 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TSPY2A6NKD2 308 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 SYN3O14994 580 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TUBB4AP04350 444 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 CYP3A4P08684 503 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TSPY3P0CV98 308 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TSPY8P0CW00 308 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 HKR1P10072 659 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TNNT1P13805 278 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 PSMA4P25789 261 aaKnown RBP3.21□□□□□ -1.9
HPS3-203ENST00000460822 GKP32189 559 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 ICAM3P32942 547 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 ACSL1P33121 698 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 IGHMBP2P38935 993 aaKnown RBP3.21□□□□□ -1.9
HPS3-203ENST00000460822 RARSP54136 660 aaKnown RBP3.21□□□□□ -1.9
HPS3-203ENST00000460822 CDH15P55291 814 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 SNX16P57768 344 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 BLOC1S1P78537 153 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TSPY1Q01534 308 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 CREB5Q02930 508 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TLE3Q04726 772 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 RESTQ13127 1097 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 ACVR2BQ13705 512 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 BECN1Q14457 450 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 CYP1B1Q16678 543 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 FAM187BQ17R55 369 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TREML2Q5T2D2 321 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 UBAP2Q5T6F2 1119 aaKnown RBP3.21□□□□□ -1.9
HPS3-203ENST00000460822 DPY19L2P1Q6NXN4 242 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 SLC30A6Q6NXT4 461 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 ACSM6Q6P461 480 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 KLHL24Q6TFL4 600 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 DTX2Q86UW9 622 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 ZNF575Q86XF7 245 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 MYCBPAPQ8TBZ2 947 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 LPIN2Q92539 896 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TBC1D5Q92609 795 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 KCNJ9Q92806 393 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 SH3KBP1Q96B97 665 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 CTHRC1Q96CG8 243 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 PRR25Q96S07 402 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 LBHD1Q9BQE6 289 aaPredicted RBP3.21□□□□□ -1.9
HPS3-203ENST00000460822 MXD3Q9BW11 206 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 FTOQ9C0B1 505 aaKnown RBP eCLIP3.21□□□□□ -1.9
HPS3-203ENST00000460822 RANBP17Q9H2T7 1088 aaKnown RBP3.21□□□□□ -1.9
HPS3-203ENST00000460822 MUC13Q9H3R2 512 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 TOR3AQ9H497 397 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 SAP30LQ9HAJ7 183 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 RXFP3Q9NSD7 469 aa3.21□□□□□ -1.9
HPS3-203ENST00000460822 THAP1Q9NVV9 213 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms