RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 LNPEPQ9UIQ6 1025 aa18.04■□□□□ 0.48
CHRD-208ENST00000460627 ADAM28Q9UKQ2 775 aa18.04■□□□□ 0.48
CHRD-208ENST00000460627 NUP188Q5SRE5 1749 aa18.04■□□□□ 0.48
CHRD-208ENST00000460627 B2RBV5 119 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 CDC25CP30307 473 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 ADSSP30520 456 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 RPL22P35268 128 aaKnown RBP18.03■□□□□ 0.48
CHRD-208ENST00000460627 XRCC4Q13426 336 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 SLC26A9Q7LBE3 791 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 STN1Q9H668 368 aaKnown RBP18.03■□□□□ 0.48
CHRD-208ENST00000460627 RCOR3Q9P2K3 495 aaPredicted RBP18.03■□□□□ 0.48
CHRD-208ENST00000460627 TTC36A6NLP5 189 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 ARIH2O95376 493 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 GLUD1P00367 558 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 ZSCAN5DPP0CG00 497 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 GOT1P17174 413 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 JAM2P57087 298 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 SPDYE7PQ495Y7 208 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 RARS2Q5T160 578 aaKnown RBP18.03■□□□□ 0.48
CHRD-208ENST00000460627 NPAS4Q8IUM7 802 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 TUBGCP3Q96CW5 907 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 COG4Q9H9E3 785 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 LCA5LO95447 670 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 TSHRP16473 764 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 PRKAA2P54646 552 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 ZNF333Q96JL9 665 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 AIM2O14862 343 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 FAM153BP0C7A2 387 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 ACADMP11310 421 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 CCNB1P14635 433 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 PSMB4P28070 264 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 TNFRSF8P28908 595 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 ADRA1BP35368 520 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 DUSP4Q13115 394 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 FAM153CQ494X1 144 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 PKN3Q6P5Z2 889 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 TPGS1Q6ZTW0 290 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 PIP4K2CQ8TBX8 421 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 IRGQQ8WZA9 623 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 NSL1Q96IY1 281 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 IGFLR1Q9H665 355 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 CTNNAL1Q9UBT7 734 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 CLCA2Q9UQC9 943 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 STXBP5LQ9Y2K9 1186 aa18.03■□□□□ 0.48
CHRD-208ENST00000460627 SP2Q02086 613 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 PCID2Q5JVF3 399 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 CSGALNACT1Q8TDX6 532 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 HNRNPABQ99729 332 aaKnown RBP18.02■□□□□ 0.48
CHRD-208ENST00000460627 COL2A1P02458 1487 aaPredicted RBP18.02■□□□□ 0.48
CHRD-208ENST00000460627 KPNA3O00505 521 aaPredicted RBP18.02■□□□□ 0.48
CHRD-208ENST00000460627 USP12O75317 370 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 PCDH8O95206 1070 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 MZF1P28698 734 aaPredicted RBP18.02■□□□□ 0.48
CHRD-208ENST00000460627 ZNF792Q3KQV3 632 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 NPNTQ6UXI9 565 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 TMEM139Q8IV31 216 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 SUSD6Q92537 303 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 ALG3Q92685 438 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 TTYH3Q9C0H2 523 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 PCDH18Q9HCL0 1135 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 RGS18Q9NS28 235 aa18.02■□□□□ 0.48
CHRD-208ENST00000460627 SNRPD1P62314 119 aaKnown RBP18.02■□□□□ 0.47
CHRD-208ENST00000460627 PPIGQ13427 754 aaKnown RBP eCLIP18.02■□□□□ 0.477e-8■■■■□ 22.3
CHRD-208ENST00000460627 CCDC153Q494R4 210 aa18.02■□□□□ 0.47
CHRD-208ENST00000460627 SDHAF4Q5VUM1 108 aa18.02■□□□□ 0.47
CHRD-208ENST00000460627 SEL1L3Q68CR1 1132 aa18.02■□□□□ 0.47
CHRD-208ENST00000460627 NEPROQ6NW34 567 aa18.02■□□□□ 0.47
CHRD-208ENST00000460627 PRPF39Q86UA1 669 aaKnown RBP18.02■□□□□ 0.47
CHRD-208ENST00000460627 CATSPER1Q8NEC5 780 aa18.02■□□□□ 0.47
CHRD-208ENST00000460627 FCRL2Q96LA5 508 aaPredicted RBP18.02■□□□□ 0.47
CHRD-208ENST00000460627 ING2Q9H160 280 aa18.02■□□□□ 0.47
CHRD-208ENST00000460627 GTF2IRD1Q9UHL9 959 aa18.02■□□□□ 0.47
CHRD-208ENST00000460627 EIF3LQ9Y262 564 aaKnown RBP18.02■□□□□ 0.47
CHRD-208ENST00000460627 DDHD2O94830 711 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 TYMPP19971 482 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 MSH3P20585 1137 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 ZNF844Q08AG5 666 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 OVGP1Q12889 678 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 RRM2BQ7LG56 351 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 XYLT1Q86Y38 959 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 DENND1CQ8IV53 801 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 STK40Q8N2I9 435 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 ARL5CA6NH57 179 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 CLCNKBP51801 687 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 MMRN1Q13201 1228 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 PDCD2Q16342 344 aaPredicted RBP18.01■□□□□ 0.47
CHRD-208ENST00000460627 DBF4BQ8NFT6 615 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 CYP4F12Q9HCS2 524 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 A0A096LPK6 155 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 C5orf58C9J3I9 102 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 FGBP02675 491 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 USP45Q70EL2 814 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 MON1BQ7L1V2 547 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 FAM136AQ96C01 138 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 PANX3Q96QZ0 392 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 LAMB4A4D0S4 1761 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 C4BP0C0L5 1744 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 EVPLLA8MZ36 301 aa18.01■□□□□ 0.47
CHRD-208ENST00000460627 SKAP2O75563 359 aaPredicted RBP18.01■□□□□ 0.47
CHRD-208ENST00000460627 CAMK2GQ13555 558 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms