RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SLC12A1Q13621 1099 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 THOC5Q13769 683 aaKnown RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 KPNB1Q14974 876 aaKnown RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 FCRLBQ6BAA4 426 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 CCDC70Q6NSX1 233 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 ZNF474Q6S9Z5 364 aaPredicted RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 SERPINA13PQ6UXR4 307 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 RANBP10Q6VN20 620 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 SYNE3Q6ZMZ3 975 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 RTL10Q7L3V2 364 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 SRFBP1Q8NEF9 429 aaKnown RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 LINS1Q8NG48 757 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 HTRA1Q92743 480 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 DPF1Q92782 380 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 ATP2A3Q93084 1043 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 CCDC17Q96LX7 622 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 SENP7Q9BQF6 1050 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 PDE11AQ9HCR9 933 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 MLXIPLQ9NP71 852 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 RRP7AQ9Y3A4 280 aaKnown RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 FNDC1Q4ZHG4 1894 aaPredicted RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 NPIPB13A6NJU9 1138 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 NPIPB5A8MRT5 1133 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 NPIPB4C9JG80 1138 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 UBE2Q2LH0YL09 131 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 SMIM22K7EJ46 135 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 SLC3A2P08195 630 aaKnown RBP3.78□□□□□ -1.8
RFC4-211ENST00000460408 PRPH2P23942 346 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 SOX2P48431 317 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 VPS41P49754 854 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 TUBP50607 506 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 VAMP2P63027 116 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 SHC2P98077 582 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 ANKRD1Q15327 319 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 CBWD5Q5RIA9 395 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 PRAMEF17Q5VTA0 474 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 JAKMIP3Q5VZ66 844 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 SUMO4Q6EEV6 95 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 ESX1Q8N693 406 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 ADPRHL1Q8NDY3 354 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 HASPINQ8TF76 798 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 CELF1Q92879 486 aaKnown RBP3.78□□□□□ -1.8
RFC4-211ENST00000460408 PPM1MQ96MI6 270 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 ASB2Q96Q27 587 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 MAF1Q9H063 256 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 NUAK2Q9H093 628 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 SFXN1Q9H9B4 322 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 PRDM16Q9HAZ2 1276 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 IFT80Q9P2H3 777 aaPredicted RBP3.78□□□□□ -1.8
RFC4-211ENST00000460408 SLC13A4Q9UKG4 626 aa3.78□□□□□ -1.8
RFC4-211ENST00000460408 LINC01548A6NM66 108 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 DHX16O60231 1041 aaKnown RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 SGPL1O95470 568 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 LATS1O95835 1130 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 ENO1P06733 434 aaKnown RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 ALDOCP09972 364 aaKnown RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 LYL1P12980 280 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 CD53P19397 219 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 TGM2P21980 687 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 AVPR2P30518 371 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 ADPRHP54922 357 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 TUBA4AP68366 448 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.77□□□□□ -1.81
RFC4-211ENST00000460408 TRPC3Q13507 836 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 SEMA3AQ14563 771 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 DLGAP5Q15398 846 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 GLE1Q53GS7 698 aaKnown RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 ATG16L1Q676U5 607 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 ANO7Q6IWH7 933 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 MDGA2Q7Z553 956 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 ENDOVQ8N8Q3 282 aaKnown RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 PNLDC1Q8NA58 520 aaKnown RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 C8orf58Q8NAV2 365 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 NAXEQ8NCW5 288 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 SEMA6DQ8NFY4 1073 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 ZFPM2Q8WW38 1151 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 IGFBPL1Q8WX77 278 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 MASTLQ96GX5 879 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 RBM17Q96I25 401 aaKnown RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 FCRL5Q96RD9 977 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 ZNF347Q96SE7 839 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 PHF7Q9BWX1 381 aaPredicted RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 TM2D2Q9BX73 214 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 HDHD5Q9BXW7 423 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 CLPBQ9H078 707 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 OSBPL5Q9H0X9 879 aaPredicted RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 TXNRD2Q9NNW7 524 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 CD207Q9UJ71 328 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 ANAPC4Q9UJX5 808 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 PKP3Q9Y446 797 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 AFG3L2Q9Y4W6 797 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 HEMK1Q9Y5R4 338 aaPredicted RBP3.77□□□□□ -1.81
RFC4-211ENST00000460408 CUX2O14529 1486 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 CECR2Q9BXF3 1484 aa3.77□□□□□ -1.81
RFC4-211ENST00000460408 C17orf100A8MU93 164 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 PRRT4C9JH25 899 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 TMEM232C9JQI7 657 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 TSPAN3O60637 253 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 ARSAP15289 507 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 HOXA7P31268 230 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms