RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 MRPS21P82921 87 aaKnown RBP6.92□□□□□ -1.3
CKAP2-204ENST00000459902 BIRC3Q13489 604 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 GPR162Q16538 588 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 ZNF484Q5JVG2 852 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 RTL10Q7L3V2 364 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 MDGA2Q7Z553 956 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 PAQR4Q8N4S7 273 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-204ENST00000459902 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 ZSCAN31Q96LW9 406 aaPredicted RBP6.92□□□□□ -1.3
CKAP2-204ENST00000459902 SIGLEC11Q96RL6 698 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 HERC2P3Q9BVR0 1158 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 SCNM1Q9BWG6 230 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 HDHD5Q9BXW7 423 aa6.92□□□□□ -1.3
CKAP2-204ENST00000459902 MOV10Q9HCE1 1003 aaKnown RBP6.92□□□□□ -1.3
CKAP2-204ENST00000459902 SEPT4O43236 478 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 LYL1P12980 280 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 TFEBP19484 476 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 PRPH2P23942 346 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 SLC12A2P55011 1212 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 SSBP2P81877 361 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-204ENST00000459902 SLC9C1Q4G0N8 1177 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 MTX3Q5HYI7 312 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 PAPD7Q5XG87 772 aaKnown RBP6.91□□□□□ -1.3
CKAP2-204ENST00000459902 ZNF626Q68DY1 528 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 TMEM200AQ86VY9 491 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 ENDOVQ8N8Q3 282 aaKnown RBP6.91□□□□□ -1.3
CKAP2-204ENST00000459902 WIPF2Q8TF74 440 aaPredicted RBP6.91□□□□□ -1.3
CKAP2-204ENST00000459902 ADAD1Q96M93 576 aaKnown RBP6.91□□□□□ -1.3
CKAP2-204ENST00000459902 COG8Q96MW5 612 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 CLPBQ9H078 707 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 SLC22A11Q9NSA0 550 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 PI4KBQ9UBF8 816 aa6.91□□□□□ -1.3
CKAP2-204ENST00000459902 E5RJQ4 531 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 STX16-NPEPL1H3BU86 382 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 STX16O14662 325 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 CSF1P09603 554 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 CTSAP10619 480 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 HOXD9P28356 352 aaPredicted RBP6.9□□□□□ -1.3
CKAP2-204ENST00000459902 ABCG1P45844 678 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 CPA2P48052 419 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 PAPOLAP51003 745 aaKnown RBP6.9□□□□□ -1.3
CKAP2-204ENST00000459902 RPS13P62277 151 aaKnown RBP6.9□□□□□ -1.3
CKAP2-204ENST00000459902 RAPGEF1Q13905 1077 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 EFR3AQ14156 821 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 EZH2Q15910 746 aaKnown RBP6.9□□□□□ -1.3
CKAP2-204ENST00000459902 SMAP1Q8IYB5 467 aaPredicted RBP6.9□□□□□ -1.3
CKAP2-204ENST00000459902 FAM47BQ8NA70 645 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 CEP70Q8NHQ1 597 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 KCNJ9Q92806 393 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 PYM1Q9BRP8 204 aaKnown RBP6.9□□□□□ -1.3
CKAP2-204ENST00000459902 NRIP3Q9NQ35 241 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 TMEM184CQ9NVA4 438 aa6.9□□□□□ -1.3
CKAP2-204ENST00000459902 IPO11Q9UI26 975 aaKnown RBP6.9□□□□□ -1.3
CKAP2-204ENST00000459902 NPIPB13A6NJU9 1138 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 NPIPB5A8MRT5 1133 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 NPIPB4C9JG80 1138 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 MCIDASD6RGH6 385 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 OVOL3O00110 214 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 EIF3FO00303 357 aaPredicted RBP6.89□□□□□ -1.31
CKAP2-204ENST00000459902 CKMT1AP12532 417 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 ZNF91Q05481 1191 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 ALKBH1Q13686 389 aaKnown RBP6.89□□□□□ -1.31
CKAP2-204ENST00000459902 PGM5Q15124 567 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 KIAA1755Q5JYT7 1200 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 MTFR2Q6P444 385 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 CYP26C1Q6V0L0 522 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 FAM57BQ71RH2 274 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 ADGRF4Q8IZF3 695 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 LINS1Q8NG48 757 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 FAM110DQ8TAY7 271 aaPredicted RBP6.89□□□□□ -1.31
CKAP2-204ENST00000459902 IP6K1Q92551 441 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 RASSF1Q9NS23 344 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 DTX4Q9Y2E6 619 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 DNAJC16Q9Y2G8 782 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 PKP3Q9Y446 797 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 ZNF804BA4D1E1 1349 aa6.89□□□□□ -1.31
CKAP2-204ENST00000459902 ADAM10O14672 748 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 HOXB9P17482 250 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-204ENST00000459902 PNPLA4P41247 253 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 Q4G0T1 1027 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 CTXN3Q4LDR2 81 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 ARL13AQ5H913 290 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-204ENST00000459902 DEF8Q6ZN54 512 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 RBM17Q96I25 401 aaKnown RBP6.88□□□□□ -1.31
CKAP2-204ENST00000459902 UBXN10Q96LJ8 280 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 PIMREGQ9BSJ6 248 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.88□□□□□ -1.31
CKAP2-204ENST00000459902 SAGE1Q9NXZ1 904 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 FBXO4Q9UKT5 387 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 BTBD3Q9Y2F9 522 aa6.88□□□□□ -1.31
CKAP2-204ENST00000459902 RRP7AQ9Y3A4 280 aaKnown RBP6.88□□□□□ -1.31
CKAP2-204ENST00000459902 KCNJ18B7U540 433 aa6.87□□□□□ -1.31
CKAP2-204ENST00000459902 TLR2O60603 784 aa6.87□□□□□ -1.31
CKAP2-204ENST00000459902 UGDHO60701 494 aa6.87□□□□□ -1.31
CKAP2-204ENST00000459902 WNT1P04628 370 aa6.87□□□□□ -1.31
CKAP2-204ENST00000459902 PKMP14618 531 aaKnown RBP6.87□□□□□ -1.31
CKAP2-204ENST00000459902 AVPR2P30518 371 aa6.87□□□□□ -1.31
CKAP2-204ENST00000459902 ID2Q02363 134 aa6.87□□□□□ -1.31
CKAP2-204ENST00000459902 ZBTB16Q05516 673 aa6.87□□□□□ -1.31
CKAP2-204ENST00000459902 TRIP6Q15654 476 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms