RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SNX30Q5VWJ9 437 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 NPNTQ6UXI9 565 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 BEND5Q7L4P6 421 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 POLNQ7Z5Q5 900 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 SLC13A5Q86YT5 568 aaPredicted RBP10.65□□□□□ -0.7
USP39-210ENST00000459775 RCOR2Q8IZ40 523 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 EXD1Q8NHP7 514 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 RIN3Q8TB24 985 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 C1orf54Q8WWF1 131 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 PBKQ96KB5 322 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 ZFRQ96KR1 1074 aaKnown RBP10.65□□□□□ -0.7
USP39-210ENST00000459775 PLEKHG4BQ96PX9 1271 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 PRRX2Q99811 253 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 OSBPL8Q9BZF1 889 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 RASSF4Q9H2L5 321 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 NSUN3Q9H649 340 aaKnown RBP10.65□□□□□ -0.7
USP39-210ENST00000459775 PIDD1Q9HB75 910 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 DNMT3LQ9UJW3 386 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 ASB3Q9Y575 518 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 KCNU1A8MYU2 1149 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 DCXO43602 365 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 MBL2P11226 248 aaPredicted RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 CEBPBP17676 345 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CASP2P42575 452 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SNX1Q13596 522 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SIX1Q15475 284 aaPredicted RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 PABPC1LQ4VXU2 614 aaKnown RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 ODF2Q5BJF6 829 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 GPR158Q5T848 1215 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 PIK3R6Q5UE93 754 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 RFWD3Q6PCD5 774 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SYCE2Q6PIF2 218 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 PDZD4Q76G19 769 aaPredicted RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 RASGEF1CQ8N431 466 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 PQLC3Q8N755 202 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 PDZD8Q8NEN9 1154 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 PCDH19Q8TAB3 1148 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CCDC26Q8TAB7 109 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CEP295NLQ96MC4 621 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SLC39A3Q9BRY0 314 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 TACO1Q9BSH4 297 aaKnown RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 SLC7A5P2Q9GIP4 190 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CLEC1BQ9P126 229 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 OR12D3Q9UGF7 316 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 EVLQ9UI08 416 aaPredicted RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 TLR6Q9Y2C9 796 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CPQQ9Y646 472 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 hCG_1818297A0A087WSY0 165 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 PGRMC1O00264 195 aaKnown RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 CST8O60676 142 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 TBX10O75333 385 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CKMP06732 381 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CCR1P32246 355 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 GBP1P32455 592 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 WHAMMP3Q1A5X7 153 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SEL1L2Q5TEA6 688 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 NADSYN1Q6IA69 706 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 C1orf228Q6PIY5 440 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 PACS1Q6VY07 963 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CIR1Q86X95 450 aaPredicted RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 RFX6Q8HWS3 928 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 DENND1CQ8IV53 801 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 KLHL7Q8IXQ5 586 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SPATA4Q8NEY3 305 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 OVCA2Q8WZ82 227 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 MRPS31Q92665 395 aaKnown RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 P2RY11Q96G91 374 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SERPINB11Q96P15 392 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 CSPG4P5Q96PW8 444 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 DDX47Q9H0S4 455 aaKnown RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 SLITRK6Q9H5Y7 841 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 ARHGEF38Q9NXL2 777 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 MPP6Q9NZW5 540 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 SPATA7Q9P0W8 599 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 UXTQ9UBK9 157 aaPredicted RBP10.64□□□□□ -0.71
USP39-210ENST00000459775 TBK1Q9UHD2 729 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 HS3ST4Q9Y661 456 aa10.64□□□□□ -0.71
USP39-210ENST00000459775 KRIT1O00522 736 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 SGTAO43765 313 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 STC2O76061 302 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 LRIG2O94898 1065 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 PRAMEF12O95522 483 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 F9P00740 461 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 PECAM1P16284 738 aaPredicted RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 KCNJ1P48048 391 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 VCPP55072 806 aaKnown RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 TRIP4Q15650 581 aaPredicted RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 DPYSL2Q16555 572 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 ANKRD20A8PQ5CZ79 823 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 EFHC2Q5JST6 749 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 PRSS36Q5K4E3 855 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 RAP1GAP2Q684P5 730 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 PRUNE1Q86TP1 453 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 CFAP52Q8N1V2 620 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 PRELID2Q8N945 189 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 ACTRT1Q8TDG2 376 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 TEKT4Q8WW24 435 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 N4BP2L2Q92802 583 aaPredicted RBP10.63□□□□□ -0.71
USP39-210ENST00000459775 TRIM62Q9BVG3 475 aa10.63□□□□□ -0.71
USP39-210ENST00000459775 KLF16Q9BXK1 252 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms