RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 MX2P20592 715 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 RPL21P46778 160 aaKnown RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 GPR15P49685 360 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 TUBP50607 506 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 CDR1P51861 262 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ATXN1P54253 815 aaKnown RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 PLTPP55058 493 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 TBX4P57082 545 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 PITX1P78337 314 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 COG7P83436 770 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 NRG1Q02297 640 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 RING1Q06587 406 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 TAF10Q12962 218 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 PDK1Q15118 436 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 TRIP4Q15650 581 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 CA9Q16790 459 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 RAB6CQ53S08 254 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 HSP90B2PQ58FF3 399 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 C10orf120Q5SQS8 335 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 SDHAF4Q5VUM1 108 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ALS2CLQ60I27 953 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 NUGGCQ68CJ6 796 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 KLHDC10Q6PID8 442 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 C1orf228Q6PIY5 440 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 RSPO2Q6UXX9 243 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 TMEM184AQ6ZMB5 413 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 PPP1R21Q6ZMI0 780 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 RFX8Q6ZV50 586 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 RTL10Q7L3V2 364 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ANKS1BQ7Z6G8 1248 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 SCD5Q86SK9 330 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 GSPT2Q8IYD1 628 aaKnown RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 ELMOD1Q8N336 334 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 LZTR1Q8N653 840 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 TTC9BQ8N6N2 239 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 PCDH19Q8TAB3 1148 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ADAM32Q8TC27 787 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ZNF512Q96ME7 567 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 RIPOR3Q96MK2 946 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 FUT8Q9BYC5 575 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 NACA2Q9H009 215 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 RAB6CQ9H0N0 254 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 S1PR5Q9H228 398 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 PLEKHA4Q9H4M7 779 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 IGFLR1Q9H665 355 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ARHGEF4Q9NR80 690 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 TLR9Q9NR96 1032 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
VPS50-207ENST00000458530 TRPM5Q9NZQ8 1165 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 PAK5Q9P286 719 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ANAPC5Q9UJX4 755 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 MAGED2Q9UNF1 606 aaPredicted RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 SHOC2Q9UQ13 582 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 SNX24Q9Y343 169 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 HBS1LQ9Y450 684 aaKnown RBP9.22□□□□□ -0.93
VPS50-207ENST00000458530 HEY1Q9Y5J3 304 aa9.22□□□□□ -0.93
VPS50-207ENST00000458530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 DNALI1O14645 258 aaPredicted RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 MAP2K7O14733 419 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 TLR5O60602 858 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 VNN2O95498 520 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 IFNB1P01574 187 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 ZDHHC11BP0C7U3 371 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 MYBL2P10244 700 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 PECAM1P16284 738 aaPredicted RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 ATF6P18850 670 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 IL4RP24394 825 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 KLRC2P26717 231 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 HSPA9P38646 679 aaKnown RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 ADCY2Q08462 1091 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 SEMA3BQ13214 749 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 DPYSQ14117 519 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 MORF4L2Q15014 288 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 PAFAH1B3Q15102 231 aaKnown RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 P3H1Q32P28 736 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 PABPC1LQ4VXU2 614 aaKnown RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 SLC45A4Q5BKX6 768 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 HECTD3Q5T447 861 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 SNX30Q5VWJ9 437 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 IZUMO3Q5VZ72 239 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 NCBP2-AS2Q69YL0 99 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 HEATR6Q6AI08 1181 aaKnown RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 PDE12Q6L8Q7 609 aaKnown RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 LRRC31Q6UY01 552 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 TMC7Q7Z402 723 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 CROCCP2Q86T23 111 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 HOOK3Q86VS8 718 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 DDX42Q86XP3 938 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS50-207ENST00000458530 UNC45BQ8IWX7 931 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 PQLC3Q8N755 202 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 GIPC2Q8TF65 315 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 TFB1MQ8WVM0 346 aaKnown RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 CASP10Q92851 521 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 ART4Q93070 314 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 PPP2R3CQ969Q6 453 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 TBC1D31Q96DN5 1066 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 RTP4Q96DX8 246 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms