RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CERS2Q96G23 380 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 SNX10Q9Y5X0 201 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 PHGDHO43175 533 aaKnown RBP20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 TTLL12Q14166 644 aaPredicted RBP20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 SATL1Q86VE3 508 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 PDSS2Q86YH6 399 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 NMD3Q96D46 503 aaKnown RBP20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 MKS1Q9NXB0 559 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 DCDC2Q9UHG0 476 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 CSADQ9Y600 493 aa20.05■□□□□ 0.8
CNEP1R1-203ENST00000458059 FAM72CH0Y354 149 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 STX16-NPEPL1H3BU86 382 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 TK2O00142 265 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FKBP6O75344 327 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 COX4I1P13073 169 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 PGAM1P18669 254 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FAM72AQ5TYM5 149 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FAM72DQ6L9T8 149 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FSTL4Q6MZW2 842 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FAM72BQ86X60 149 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FAM156AQ8NDB6 213 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 KLHL4Q9C0H6 718 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 NXF3Q9H4D5 531 aaKnown RBP20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 CLIC5Q9NZA1 410 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 INPP5FQ9Y2H2 1132 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 A0A096LPK6 155 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 IGFBP6P24592 240 aaPredicted RBP20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 MRPS22P82650 360 aaKnown RBP20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 SYPL2Q5VXT5 272 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FBXL19Q6PCT2 694 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 NUF2Q9BZD4 464 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 CDHR5Q9HBB8 845 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 SLC39A10Q9ULF5 831 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 CCDC160A6NGH7 325 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 M0QYT0 321 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 KIF3CO14782 793 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 POLBP06746 335 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 SPATA31D3P0C874 917 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 ARSAP15289 507 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 TKTP29401 623 aaKnown RBP20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 SPATA31D4Q6ZUB0 917 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 PTAR1Q7Z6K3 402 aaPredicted RBP20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 SDCCAG8Q86SQ7 713 aaPredicted RBP20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 SNX32Q86XE0 403 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 RNF139Q8WU17 664 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 VPS33BQ9H267 617 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 SSX2IPQ9Y2D8 614 aa20.04■□□□□ 0.8
CNEP1R1-203ENST00000458059 ZNF195O14628 629 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 CNMDO75829 334 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 BEST1O76090 585 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 VCLP18206 1134 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 GK3PQ14409 553 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 ZNF460Q14592 562 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 TBCCQ15814 346 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 LRRC8BQ6P9F7 803 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 HFE2Q6ZVN8 426 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 TDRD5Q8NAT2 981 aaKnown RBP20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 USP33Q8TEY7 942 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 SGF29Q96ES7 293 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 NR1H4Q96RI1 486 aaPredicted RBP20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 C1orf21Q9H246 121 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 VRTNQ9H8Y1 702 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 DDX43Q9NXZ2 648 aaKnown RBP20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 SPTLC1O15269 473 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 ENO3P13929 434 aaPredicted RBP20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 MX2P20592 715 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 KLF10Q13118 480 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 ITGA7Q13683 1181 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 TTLL4Q14679 1199 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 LIN52Q52LA3 116 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 PAOXQ6QHF9 649 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 TIFABQ6ZNK6 161 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 KDELC2Q7Z4H8 507 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 MFN1Q8IWA4 741 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 CMTM5Q96DZ9 223 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 GPAMQ9HCL2 828 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 CHRAC1Q9NRG0 131 aa20.03■□□□□ 0.8
CNEP1R1-203ENST00000458059 ATP6V1B1P15313 513 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 GP5P40197 560 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 ADCYAP1R1P41586 468 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 GSTA3Q16772 222 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 C11orf91Q3C1V1 193 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 PIGZQ86VD9 579 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 ST13P4Q8IZP2 240 aaPredicted RBP20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 PNPLA1Q8N8W4 532 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 SNX31Q8N9S9 440 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 SCYL1Q96KG9 808 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 CATSPER2Q96P56 530 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 TRAPPC9Q96Q05 1148 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 GCOM2Q9BZD3 368 aaPredicted RBP20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 IARS2Q9NSE4 1012 aaKnown RBP20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 RBPJLQ9UBG7 517 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 MORF4L1Q9UBU8 362 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 BRCA2P51587 3418 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 JUNP05412 331 aaKnown RBP20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 GNL1P36915 607 aaPredicted RBP20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 CDK7P50613 346 aa20.02■□□□□ 0.8
CNEP1R1-203ENST00000458059 IL31Q6EBC2 164 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms