RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 STK39Q9UEW8 545 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 ERCC2P18074 760 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 FAM45BPQ6NSW5 357 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 MRASO14807 208 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 NFKB1P19838 968 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 C15orf59Q2T9L4 293 aaPredicted RBP20.03■□□□□ 0.8
SNX27-204ENST00000458013 POLNQ7Z5Q5 900 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 ABRAQ8N0Z2 381 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 DEFB106AQ8N104 65 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 NSMCE2Q96MF7 247 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 TAS2R14Q9NYV8 317 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 TUBGCP4Q9UGJ1 667 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 ADAM30Q9UKF2 790 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 ANKRD63C9JTQ0 380 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 MFN2O95140 757 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 ALDH2P05091 517 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 TSPAN19P0C672 248 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 BEX3Q00994 111 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 RALGDSQ12967 914 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 LRRC74BQ6ZQY2 392 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 FRMD8P1Q9BZ68 369 aaPredicted RBP20.02■□□□□ 0.8
SNX27-204ENST00000458013 A0A087X0B3 334 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 SNPHO15079 494 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 YBX3P16989 372 aaKnown RBP eCLIP20.02■□□□□ 0.82e-7■■□□□ 13.3
SNX27-204ENST00000458013 SGCGQ13326 291 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 PPP1R26Q5T8A7 1209 aaPredicted RBP20.02■□□□□ 0.8
SNX27-204ENST00000458013 OVOS1Q6IE37 1185 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 DSG4Q86SJ6 1040 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 ALG9Q9H6U8 611 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 CHST7Q9NS84 486 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 PROCP04070 461 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 STYK1Q6J9G0 422 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 CDK20Q8IZL9 346 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 UCMAQ8WVF2 138 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 PURBQ96QR8 312 aaKnown RBP20.02■□□□□ 0.8
SNX27-204ENST00000458013 FBXO6Q9NRD1 293 aaPredicted RBP20.02■□□□□ 0.8
SNX27-204ENST00000458013 DSEQ9UL01 958 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 SIK3Q9Y2K2 1263 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 VAV1P15498 845 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 RBL1P28749 1068 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 PALB2Q86YC2 1186 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 AHCYL2Q96HN2 611 aaKnown RBP20.02■□□□□ 0.8
SNX27-204ENST00000458013 ADI1Q9BV57 179 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 DIABLOQ9NR28 239 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 BTRCQ9Y297 605 aa20.02■□□□□ 0.8
SNX27-204ENST00000458013 RAD51BO15315 384 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 ASNA1O43681 348 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 ZNF75CPQ92670 426 aaPredicted RBP20.02■□□□□ 0.79
SNX27-204ENST00000458013 APOPT1Q96IL0 206 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 KLHL31Q9H511 634 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 KCNQ5Q9NR82 932 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 IPPQ9Y573 584 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 RAMP2O60895 175 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 PWWP2AQ96N64 755 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 INVSQ9Y283 1065 aa20.02■□□□□ 0.79
SNX27-204ENST00000458013 CNPP09543 421 aaKnown RBP20.01■□□□□ 0.79
SNX27-204ENST00000458013 ZNF844Q08AG5 666 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 UBAP2LQ14157 1087 aaKnown RBP20.01■□□□□ 0.79
SNX27-204ENST00000458013 METTL6Q8TCB7 284 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 RTFDC1Q9BY42 306 aaPredicted RBP20.01■□□□□ 0.79
SNX27-204ENST00000458013 RRAGCQ9HB90 399 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 ACSS2Q9NR19 701 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 RAD54BQ9Y620 910 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 FFAR3O14843 346 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 GPR42O15529 346 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 TAF13Q15543 124 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 TMEM159Q96B96 161 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 MYL12BO14950 172 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 CLOCKO15516 846 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 IFNA14P01570 189 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 COX7A2P14406 83 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 LLGL2Q6P1M3 1020 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 KLHL24Q6TFL4 600 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 SYT12Q8IV01 421 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 CPNE1Q99829 537 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 OR6B1O95007 311 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 POLD2P49005 469 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 ZNF280DQ6N043 979 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 ZC3H7AQ8IWR0 971 aaKnown RBP20.01■□□□□ 0.79
SNX27-204ENST00000458013 ITFG1Q8TB96 612 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 KIFC1Q9BW19 673 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 SLC4A5Q9BY07 1137 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 CNGB3Q9NQW8 809 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 SPG21Q9NZD8 308 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 PTENP60484 403 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 WDR93Q6P2C0 686 aa20.01■□□□□ 0.79
SNX27-204ENST00000458013 INTS5Q6P9B9 1019 aaKnown RBP20.01■□□□□ 0.79
SNX27-204ENST00000458013 DCDC2CA8MYV0 355 aa20■□□□□ 0.79
SNX27-204ENST00000458013 TMC3Q7Z5M5 1100 aa20■□□□□ 0.79
SNX27-204ENST00000458013 RMND5BQ96G75 393 aaPredicted RBP20■□□□□ 0.79
SNX27-204ENST00000458013 BARX2Q9UMQ3 279 aaPredicted RBP20■□□□□ 0.79
SNX27-204ENST00000458013 SMIM31A0A1B0GVY4 71 aa20■□□□□ 0.79
SNX27-204ENST00000458013 HNF4AP41235 474 aa20■□□□□ 0.79
SNX27-204ENST00000458013 CBWD6Q4V339 395 aa20■□□□□ 0.79
SNX27-204ENST00000458013 SPANXN3Q5MJ09 141 aa20■□□□□ 0.79
SNX27-204ENST00000458013 TSEN2Q8NCE0 465 aaKnown RBP20■□□□□ 0.79
SNX27-204ENST00000458013 CHD1O14646 1710 aa20■□□□□ 0.79
SNX27-204ENST00000458013 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
SNX27-204ENST00000458013 FAM237BA0A1B0GVD1 139 aa20■□□□□ 0.79
SNX27-204ENST00000458013 E5RJQ4 531 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms