RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 COL4A3Q01955 1670 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 PGRMC1O00264 195 aaKnown RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 APOL1O14791 398 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 NCAM2O15394 837 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 DAPK3O43293 454 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 CACNG3O60359 315 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 CST8O60676 142 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 CNTN5O94779 1100 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 LUC7L3O95232 432 aaKnown RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 ADH1CP00326 375 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 FGGP02679 453 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 CYP17A1P05093 508 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 KRT10P13645 584 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 EIF2DP41214 584 aaKnown RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 IRAK1P51617 712 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 SGSHP51688 502 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 NDST2P52849 883 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 OXCT1P55809 520 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 YBEYP58557 167 aaPredicted RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 TFF2Q03403 129 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 GAD2Q05329 585 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 ZNF33AQ06730 810 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 CYP1B1Q16678 543 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 WHAMMP3Q1A5X7 153 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 GAB4Q2WGN9 574 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 LY6G5CQ5SRR4 150 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 RWDD4Q6NW29 188 aaKnown RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 DRICH1Q6PGQ1 229 aaPredicted RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 BZW1Q7L1Q6 419 aaKnown RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 TMEM25Q86YD3 366 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 LRRC49Q8IUZ0 686 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 YAF2Q8IY57 180 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 TTC13Q8NBP0 860 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 FIBINQ8TAL6 211 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 ATXN2LQ8WWM7 1075 aaKnown RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 DNASE1L2Q92874 299 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 LMLNQ96KR4 655 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 OLFM3Q96PB7 478 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 KXD1Q9BQD3 176 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 RPP25Q9BUL9 199 aaKnown RBP11.57□□□□□ -0.56
TRAF4-206ENST00000454852 LRRC19Q9H756 370 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 ECT2Q9H8V3 914 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 L2HGDHQ9H9P8 463 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 KCNK12Q9HB15 430 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 PRDM6Q9NQX0 595 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 ETNK2Q9NVF9 386 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 MPP6Q9NZW5 540 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 MRFAP1Q9Y605 127 aa11.57□□□□□ -0.56
TRAF4-206ENST00000454852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 ILVBLA1L0T0 632 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 SCAMP3O14828 347 aaKnown RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 ZNF185O15231 689 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 TBL1XO60907 577 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 ZNF189O75820 626 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 PLK1P53350 603 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 ZP2Q05996 745 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 NR1H3Q13133 447 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 ZNF177Q13360 481 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 XRCC4Q13426 336 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 SLC12A1Q13621 1099 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 RUNX3Q13761 415 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 NOMO1Q15155 1222 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 PARP15Q460N3 678 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 CXorf57Q6NSI4 855 aaKnown RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 KIAA0907Q7Z7F0 614 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 RFX6Q8HWS3 928 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 ARHGAP12Q8IWW6 846 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 ETFBKMTQ8IXQ9 262 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 SLC44A3Q8N4M1 653 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 CPA6Q8N4T0 437 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 NPWQ8N729 165 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 C12orf50Q8NA57 414 aaPredicted RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 DDI1Q8WTU0 396 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 FATE1Q969F0 183 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 RPGRIP1Q96KN7 1286 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 BRD8Q9H0E9 1235 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 MAGEH1Q9H213 219 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 NOL6Q9H6R4 1146 aaKnown RBP11.56□□□□□ -0.56
TRAF4-206ENST00000454852 HOMER3Q9NSC5 361 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 DTLQ9NZJ0 730 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 EYSQ5T1H1 3165 aa11.56□□□□□ -0.56
TRAF4-206ENST00000454852 TCRBV7S2A1N4TA0A589 114 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 PDE2AO00408 941 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-206ENST00000454852 TRDMT1O14717 391 aaKnown RBP11.55□□□□□ -0.56
TRAF4-206ENST00000454852 TSPAN3O60637 253 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 URI1O94763 535 aaPredicted RBP11.55□□□□□ -0.56
TRAF4-206ENST00000454852 ADH5P11766 374 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 TYRP14679 529 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 ARSAP15289 507 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 MX2P20592 715 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 GDI1P31150 447 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 ETFBP38117 255 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 PAFAH1B1P43034 410 aa11.55□□□□□ -0.56
TRAF4-206ENST00000454852 VCPP55072 806 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms