RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 CAVIN2O95810 425 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 CALB1P05937 261 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 SDC4P31431 198 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 PTGER3P43115 390 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 ALFQ53S48 1182 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 TCEAL6Q6IPX3 200 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 TCEAL3Q969E4 200 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 LOXL4Q96JB6 756 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 MPP6Q9NZW5 540 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 SLCO3A1Q9UIG8 710 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 ERVW-1Q9UQF0 538 aa25.64■■□□□ 1.7
MSH2-203ENST00000454849 RALGAPA1Q6GYQ0 2036 aa25.64■■□□□ 1.69
MSH2-203ENST00000454849 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.63■■□□□ 1.69
MSH2-203ENST00000454849 IGHV1OR15-9A0A0B4J2B8 117 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 A0A1B0GVM2 712 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 TCAF2A6NFQ2 919 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 GDF9O60383 454 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 RRM1P23921 792 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 MPLP40238 635 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 STK19P49842 368 aaPredicted RBP25.63■■□□□ 1.69
MSH2-203ENST00000454849 COPAP53621 1224 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 ZNF177Q13360 481 aaPredicted RBP25.63■■□□□ 1.69
MSH2-203ENST00000454849 BYSLQ13895 437 aaKnown RBP25.63■■□□□ 1.69
MSH2-203ENST00000454849 NFKBIBQ15653 356 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 PLEKHG6Q3KR16 790 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 CXorf57Q6NSI4 855 aaKnown RBP25.63■■□□□ 1.69
MSH2-203ENST00000454849 WDR59Q6PJI9 974 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 LPCAT2Q7L5N7 544 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 BNIPLQ7Z465 357 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 ZNF557Q8N988 423 aaPredicted RBP25.63■■□□□ 1.69
MSH2-203ENST00000454849 RNF214Q8ND24 703 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 SIPA1Q96FS4 1042 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 MRGPRX3Q96LB0 322 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 PRSS16Q9NQE7 514 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 AIPL1Q9NZN9 384 aa25.63■■□□□ 1.69
MSH2-203ENST00000454849 TTC34A8MYJ7 566 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 ATMINO43313 823 aaPredicted RBP25.62■■□□□ 1.69
MSH2-203ENST00000454849 PBX1P40424 430 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 RPL6Q02878 288 aaKnown RBP25.62■■□□□ 1.69
MSH2-203ENST00000454849 C1QBPQ07021 282 aaKnown RBP25.62■■□□□ 1.69
MSH2-203ENST00000454849 KLHL30Q0D2K2 578 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 CSRP2Q16527 193 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 DNAJC24Q6P3W2 148 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 PRR23CQ6ZRP0 262 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 ARCQ7LC44 396 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 TFAP2DQ7Z6R9 452 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 FAM124AQ86V42 546 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 ZNF683Q8IZ20 524 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 MCOLN2Q8IZK6 566 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 PIGKQ92643 395 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 RMDN1Q96DB5 314 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 MYO19Q96H55 970 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 TSPY26PQ9H489 355 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 RXFP3Q9NSD7 469 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 DMXL1Q9Y485 3027 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 CEP250Q9BV73 2442 aa25.62■■□□□ 1.69
MSH2-203ENST00000454849 BCLAF3A2AJT9 711 aaKnown RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 MOCS3O95396 460 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 ST8SIA6P61647 398 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 RPL7AP62424 266 aaKnown RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 ECT2LQ008S8 904 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 CAMK2GQ13555 558 aaPredicted RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 E2F5Q15329 346 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 RSPO4Q2I0M5 234 aaPredicted RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 TTC39BQ5VTQ0 682 aaPredicted RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 RNF219Q5W0B1 726 aaPredicted RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 CYP2U1Q7Z449 544 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 C11orf74Q86VG3 221 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 C3orf20Q8ND61 904 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 OR2T3Q8NH03 318 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 FAM172AQ8WUF8 416 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 PRCCQ92733 491 aaPredicted RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 MCEEQ96PE7 176 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 XPO4Q9C0E2 1151 aaKnown RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 PAXBP1Q9Y5B6 917 aa25.61■■□□□ 1.69
MSH2-203ENST00000454849 ATXN2Q99700 1313 aaKnown RBP25.61■■□□□ 1.69
MSH2-203ENST00000454849 TCRBV5S1A1TA0A578 114 aa25.6■■□□□ 1.69
MSH2-203ENST00000454849 SIGLEC16A6NMB1 481 aa25.6■■□□□ 1.69
MSH2-203ENST00000454849 E9PAM4 449 aa25.6■■□□□ 1.69
MSH2-203ENST00000454849 DDX3XO00571 662 aaKnown RBP eCLIP25.6■■□□□ 1.693e-14■□□□□ 9.2
MSH2-203ENST00000454849 ENDOD1O94919 500 aa25.6■■□□□ 1.69
MSH2-203ENST00000454849 GPD1P21695 349 aa25.6■■□□□ 1.69
MSH2-203ENST00000454849 ARTNQ5T4W7 220 aa25.6■■□□□ 1.69
MSH2-203ENST00000454849 LRRC31Q6UY01 552 aa25.6■■□□□ 1.69
MSH2-203ENST00000454849 GPR161Q8N6U8 529 aaKnown RBP25.6■■□□□ 1.69
MSH2-203ENST00000454849 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.59■■□□□ 1.69
MSH2-203ENST00000454849 PATE3B3GLJ2 98 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 LRP3O75074 770 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 ZNF217O75362 1048 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 ASLP04424 464 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 TPMTP51580 245 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 HDAC4P56524 1084 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 CCDC185Q8N715 623 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 FEM1AQ9BSK4 669 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 EDEM3Q9BZQ6 932 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 ITM2CQ9NQX7 267 aa25.59■■□□□ 1.69
MSH2-203ENST00000454849 MUC22E2RYF6 1773 aaPredicted RBP25.59■■□□□ 1.69
MSH2-203ENST00000454849 CCP110O43303 1012 aa25.58■■□□□ 1.69
MSH2-203ENST00000454849 SIN3BO75182 1162 aa25.58■■□□□ 1.69
MSH2-203ENST00000454849 NDUFS2O75306 463 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms