RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TAC1P20366 129 aa14□□□□□ -0.17
CLK3-203ENST00000454830 SAT1P21673 171 aa14□□□□□ -0.17
CLK3-203ENST00000454830 GARSP41250 739 aaKnown RBP14□□□□□ -0.17
CLK3-203ENST00000454830 ARHGAP36Q6ZRI8 547 aa14□□□□□ -0.17
CLK3-203ENST00000454830 SCD5Q86SK9 330 aa14□□□□□ -0.17
CLK3-203ENST00000454830 RASSF3Q86WH2 238 aa14□□□□□ -0.17
CLK3-203ENST00000454830 IPMKQ8NFU5 416 aa14□□□□□ -0.17
CLK3-203ENST00000454830 LRRC39Q96DD0 335 aa14□□□□□ -0.17
CLK3-203ENST00000454830 HIPK3Q9H422 1215 aa14□□□□□ -0.17
CLK3-203ENST00000454830 ZWINTO95229 277 aa14□□□□□ -0.17
CLK3-203ENST00000454830 YWHAQP27348 245 aa14□□□□□ -0.17
CLK3-203ENST00000454830 CYP2C18P33260 490 aa14□□□□□ -0.17
CLK3-203ENST00000454830 USP46P62068 366 aa14□□□□□ -0.17
CLK3-203ENST00000454830 COG7P83436 770 aa14□□□□□ -0.17
CLK3-203ENST00000454830 OVGP1Q12889 678 aa14□□□□□ -0.17
CLK3-203ENST00000454830 ZBTB17Q13105 803 aa14□□□□□ -0.17
CLK3-203ENST00000454830 FUT10Q6P4F1 479 aa14□□□□□ -0.17
CLK3-203ENST00000454830 OTOP3Q7RTS5 596 aa14□□□□□ -0.17
CLK3-203ENST00000454830 PPP1R14CQ8TAE6 165 aa14□□□□□ -0.17
CLK3-203ENST00000454830 TBC1D31Q96DN5 1066 aa14□□□□□ -0.17
CLK3-203ENST00000454830 CATSPERBQ9H7T0 1116 aa14□□□□□ -0.17
CLK3-203ENST00000454830 DCTN4Q9UJW0 460 aa14□□□□□ -0.17
CLK3-203ENST00000454830 ASMTLO95671 621 aa14□□□□□ -0.17
CLK3-203ENST00000454830 ERVK-10P10266 1014 aa14□□□□□ -0.17
CLK3-203ENST00000454830 TBX4P57082 545 aa14□□□□□ -0.17
CLK3-203ENST00000454830 SCAPQ12770 1279 aa14□□□□□ -0.17
CLK3-203ENST00000454830 TRAF7Q6Q0C0 670 aa14□□□□□ -0.17
CLK3-203ENST00000454830 ZNF534Q76KX8 674 aa14□□□□□ -0.17
CLK3-203ENST00000454830 NDUFAF2Q8N183 169 aa14□□□□□ -0.17
CLK3-203ENST00000454830 SERPINB11Q96P15 392 aa14□□□□□ -0.17
CLK3-203ENST00000454830 FBXO44Q9H4M3 255 aa14□□□□□ -0.17
CLK3-203ENST00000454830 SMYD2Q9NRG4 433 aa14□□□□□ -0.17
CLK3-203ENST00000454830 PHTF1Q9UMS5 762 aa14□□□□□ -0.17
CLK3-203ENST00000454830 SF3B1O75533 1304 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLK3-203ENST00000454830 SLC12A8A0AV02 714 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 CCT8L1PA6NM43 557 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 GOLGA8TH3BQL2 631 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PMPCBO75439 489 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 TSHRP16473 764 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PAX3P23760 479 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 ABCG1P45844 678 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 ALDH7A1P49419 539 aaKnown RBP13.99□□□□□ -0.17
CLK3-203ENST00000454830 TAF10Q12962 218 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PSMD5Q16401 504 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 MON1AQ86VX9 555 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PPM1EQ8WY54 764 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 ZCWPW1Q9H0M4 648 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 ATXN3LQ9H3M9 355 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PCDHA11Q9Y5I1 949 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PRPF4O43172 522 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLK3-203ENST00000454830 POLBP06746 335 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 MAP2K2P36507 400 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 ALKBH8Q96BT7 664 aaKnown RBP13.99□□□□□ -0.17
CLK3-203ENST00000454830 PABPC5Q96DU9 382 aaKnown RBP13.99□□□□□ -0.17
CLK3-203ENST00000454830 PRDM16Q9HAZ2 1276 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 ABCF3Q9NUQ8 709 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 CDY1Q9Y6F8 540 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 SHROOM3Q8TF72 1996 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
CLK3-203ENST00000454830 OAZ2O95190 189 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 GNRH1P01148 92 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 CDK16Q00536 496 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PCSK7Q16549 785 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 TEX44Q53QW1 395 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 TRPM8Q7Z2W7 1104 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 ARMC2Q8NEN0 867 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 SPATA22Q8NHS9 363 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 PGAP3Q96FM1 320 aaPredicted RBP13.99□□□□□ -0.17
CLK3-203ENST00000454830 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 CCDC134Q9H6E4 229 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 OSER1Q9NX31 292 aa13.99□□□□□ -0.17
CLK3-203ENST00000454830 MTSS1O43312 755 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 MAGEA9P43362 315 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 PPIDQ08752 370 aaKnown RBP13.98□□□□□ -0.17
CLK3-203ENST00000454830 CERCAMQ5T4B2 595 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 FYB2Q5VWT5 728 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 LRRC8BQ6P9F7 803 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 C14orf80Q86SX3 495 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 PNPLA8Q9NP80 782 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 ATP11BQ9Y2G3 1177 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 BRMS1LQ5PSV4 323 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 PIGWQ7Z7B1 504 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 TMEM173Q86WV6 379 aaPredicted RBP13.98□□□□□ -0.17
CLK3-203ENST00000454830 FAM126BQ8IXS8 530 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 SRPK1Q96SB4 655 aaKnown RBP13.98□□□□□ -0.17
CLK3-203ENST00000454830 NPHS2Q9NP85 383 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 GRID1Q9ULK0 1009 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 PHF24Q9UPV7 400 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 ARL2BPQ9Y2Y0 163 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 SYN3O14994 580 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 TYROBPO43914 113 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 CCNB1P14635 433 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 FAM189BP81408 668 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 SEMA3BQ13214 749 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 SEPT6Q14141 434 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 CRYMQ14894 314 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 RTP2Q5QGT7 225 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 BNIPLQ7Z465 357 aa13.98□□□□□ -0.17
CLK3-203ENST00000454830 ZNF75CPQ92670 426 aaPredicted RBP13.98□□□□□ -0.17
CLK3-203ENST00000454830 APOPT1Q96IL0 206 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms