RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 DNTTP04053 509 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SRPRAP08240 638 aaKnown RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 GNSP15586 552 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 MZF1P28698 734 aaPredicted RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SOX5P35711 763 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SCNN1AP37088 669 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 IRAK1P51617 712 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 NOMO3P69849 1222 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 ECT2LQ008S8 904 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 ZBTB16Q05516 673 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 MTA1Q13330 715 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 AUHQ13825 339 aaKnown RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SYCP1Q15431 976 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 HNRNPA1L2Q32P51 320 aaKnown RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 TTC39BQ5VTQ0 682 aaPredicted RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 DCAF12L1Q5VU92 463 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 RNF219Q5W0B1 726 aaPredicted RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 ZNF776Q68DI1 518 aaPredicted RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 C14orf80Q86SX3 495 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 DHX40Q8IX18 779 aaKnown RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 ZCCHC9Q8N567 271 aaKnown RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 MSANTD4Q8NCY6 345 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 ANKRD20A12PQ8NF67 263 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 OR2I1PQ8NGU4 316 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 CPA5Q8WXQ8 436 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 DNASE2BQ8WZ79 361 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 IGSF8Q969P0 613 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 PCMTD1Q96MG8 357 aaPredicted RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SPAG5Q96R06 1193 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 ADAM33Q9BZ11 813 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SIK2Q9H0K1 926 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 MIR1-1HGQ9H1L0 117 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 ANLNQ9NQW6 1124 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 PIGVQ9NUD9 493 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 LIMA1Q9UHB6 759 aaKnown RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SLCO3A1Q9UIG8 710 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 NOCTQ9UK39 431 aaKnown RBP11.11□□□□□ -0.63
LMCD1-205ENST00000454244 VANGL2Q9ULK5 521 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 SIK3Q9Y2K2 1263 aa11.11□□□□□ -0.63
LMCD1-205ENST00000454244 PLXND1Q9Y4D7 1925 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 NUP205Q92621 2012 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 A0A1B0GTW7 788 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 LGALS16A8MUM7 142 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 ARHGAP33O14559 1287 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 GIPC1O14908 333 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 ADCY5O95622 1261 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 SYPP08247 313 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 C7P10643 843 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 ACSL1P33121 698 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 FLT3P36888 993 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 CXCR3P49682 368 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 STK19P49842 368 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 OXCT1P55809 520 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 JAM2P57087 298 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 CDR2Q01850 454 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 DEUP1Q05D60 604 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 SLC12A1Q13621 1099 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 NCAPHQ15003 741 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 TTC31Q49AM3 519 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 BRMS1LQ5PSV4 323 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 C9orf64Q5T6V5 341 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 SH3PXD2AQ5TCZ1 1133 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 CXorf57Q6NSI4 855 aaKnown RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 SND1Q7KZF4 910 aaKnown RBP eCLIP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 ZNF677Q86XU0 584 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 HDDC3Q8N4P3 179 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 MINDY1Q8N5J2 469 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 KDM1BQ8NB78 822 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 DEFB124Q8NES8 71 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 GANCQ8TET4 914 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 SNX19Q92543 992 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 NT5C3BQ969T7 300 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 RPL10LQ96L21 214 aaKnown RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 TBCBQ99426 244 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 BTBD1Q9H0C5 482 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 TKTL2Q9H0I9 626 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 RSPH9Q9H1X1 276 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 C6orf106Q9H6K1 298 aaPredicted RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 WDCPQ9H6R7 721 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 ARHGEF38Q9NXL2 777 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 EIF2B4Q9UI10 523 aaKnown RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 SNX10Q9Y5X0 201 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 FRYLO94915 3013 aa11.1□□□□□ -0.63
LMCD1-205ENST00000454244 CNOT1A5YKK6 2376 aaKnown RBP11.1□□□□□ -0.63
LMCD1-205ENST00000454244 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 DCHS1Q96JQ0 3298 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-205ENST00000454244 EDDM13A0A1B0GTR0 161 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 TARSL2A2RTX5 802 aaKnown RBP11.09□□□□□ -0.63
LMCD1-205ENST00000454244 I6L893 689 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-205ENST00000454244 OPHN1O60890 802 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 RNASEH1O60930 286 aaKnown RBP11.09□□□□□ -0.63
LMCD1-205ENST00000454244 SEMA4FO95754 770 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 F9P00740 461 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 CYP1A1P04798 512 aaPredicted RBP11.09□□□□□ -0.63
LMCD1-205ENST00000454244 ZNF18P17022 549 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 CHRNB2P17787 502 aa11.09□□□□□ -0.63
LMCD1-205ENST00000454244 CSRP1P21291 193 aaKnown RBP11.09□□□□□ -0.63
LMCD1-205ENST00000454244 PMLP29590 882 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms