RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 L1CAMP32004 1257 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 ZNF177Q13360 481 aaPredicted RBP28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 SLC12A1Q13621 1099 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 CYP4V2Q6ZWL3 525 aaPredicted RBP28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 TRMT11Q7Z4G4 463 aaKnown RBP28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 PYROXD2Q8N2H3 581 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 CCDC33Q8N5R6 958 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 TXNDC5Q8NBS9 432 aaKnown RBP28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 SLC35G2Q8TBE7 412 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 UCMAQ8WVF2 138 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 ZYG11BQ9C0D3 744 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 OSGEPQ9NPF4 335 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 POLR3BQ9NW08 1133 aaPredicted RBP28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 PCSK1NQ9UHG2 260 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 USP18Q9UMW8 372 aa28.82■■■□□ 2.2
SMARCC1-203ENST00000454240 ADAM23O75077 832 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 LRIG2O94898 1065 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 NDUFA10O95299 355 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 TDGF1P13385 188 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 COL9A1P20849 921 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 OXCT1P55809 520 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 DMC1Q14565 340 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 TCEAL1Q15170 157 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 FUT11Q495W5 492 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 ERMARDQ5T6L9 678 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 DAB2IPQ5VWQ8 1189 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 MBLAC2Q68D91 279 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 RAD9BQ6WBX8 426 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 RHOT2Q8IXI1 618 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 ACOX2Q99424 681 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 CIPCQ9C0C6 399 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 THAP10Q9P2Z0 257 aaPredicted RBP28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 ZNF212Q9UDV6 495 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 NEU3Q9UQ49 428 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 PCDHA13Q9Y5I0 950 aa28.81■■■□□ 2.2
SMARCC1-203ENST00000454240 K7ESF4 209 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 SGK1O00141 431 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 NPC1O15118 1278 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 PRPSAP2O60256 369 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 NTSR1P30989 418 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 PLK1P53350 603 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 CSTF1Q05048 431 aaKnown RBP28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 SEMA3BQ13214 749 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 E2F5Q15329 346 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 SPA17Q15506 151 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 ZNF528Q3MIS6 628 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 EOGTQ5NDL2 527 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 OR52K2Q8NGK3 314 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 RFFLQ8WZ73 363 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 TTC17Q96AE7 1141 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 SNRNP25Q9BV90 132 aaKnown RBP28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 RETREG1Q9H6L5 497 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 LCMT1Q9UIC8 334 aa28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 MUC22E2RYF6 1773 aaPredicted RBP28.8■■■□□ 2.2
SMARCC1-203ENST00000454240 MTA2O94776 668 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 GSDMDP57764 484 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 ENPP2Q13822 863 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 PLEKHG6Q3KR16 790 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 PITRM1Q5JRX3 1037 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 TSSK4Q6SA08 328 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 SETD3Q86TU7 594 aaPredicted RBP28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 PSTKQ8IV42 348 aaKnown RBP28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 SORCS1Q8WY21 1168 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 ALG14Q96F25 216 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 AP4E1Q9UPM8 1137 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 SLC8A2Q9UPR5 921 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 CHD5Q8TDI0 1954 aa28.79■■■□□ 2.2
SMARCC1-203ENST00000454240 H0Y858 1186 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 PROSCO94903 275 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 SP9P0CG40 484 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 TCF4P15884 667 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 POLR2EP19388 210 aaKnown RBP28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 IL1R2P27930 398 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 MZF1P28698 734 aaPredicted RBP28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 HOXC13P31276 330 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 CSKP41240 450 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 CRY1Q16526 586 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 CHPFQ8IZ52 775 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 APCDD1Q8J025 514 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 TBC1D31Q96DN5 1066 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 GABRG3Q99928 467 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 GPATCH2LQ9NWQ4 482 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 OR51B4Q9Y5P0 310 aa28.78■■■□□ 2.2
SMARCC1-203ENST00000454240 FANCMQ8IYD8 2048 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 MOCS3O95396 460 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 ATP5BP06576 529 aaKnown RBP28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 DLDP09622 509 aaKnown RBP28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 RHOQP17081 205 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 HOXA6P31267 233 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 PTPN5P54829 565 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 ZNF234Q14588 700 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 CA9Q16790 459 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 RWDD4Q6NW29 188 aaKnown RBP28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 TMEM92Q6UXU6 159 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 TFAP2DQ7Z6R9 452 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 NLRP14Q86W24 1093 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 NELL1Q92832 810 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 PPP1R9BQ96SB3 815 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 FEM1AQ9BSK4 669 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 LUC7LQ9NQ29 371 aaKnown RBP28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms