RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ACADVLP49748 655 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 TBX4P57082 545 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 ILKQ13418 452 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 PNOCQ13519 176 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 CNGA2Q16280 664 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 FSCBQ5H9T9 825 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 C6orf118Q5T5N4 469 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 FBXL19Q6PCT2 694 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 DHX40Q8IX18 779 aaKnown RBP12.09□□□□□ -0.47
HERC3-207ENST00000452979 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
HERC3-207ENST00000452979 ADAM32Q8TC27 787 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 GANCQ8TET4 914 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 MYEOVQ96EZ4 313 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 CNDP2Q96KP4 475 aaKnown RBP12.09□□□□□ -0.47
HERC3-207ENST00000452979 FCRL2Q96LA5 508 aaPredicted RBP12.09□□□□□ -0.47
HERC3-207ENST00000452979 PRICKLE1Q96MT3 831 aaPredicted RBP12.09□□□□□ -0.47
HERC3-207ENST00000452979 OMDQ99983 421 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 GDF3Q9NR23 364 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 TMEM63CQ9P1W3 806 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 STIM2Q9P246 746 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 ERVW-1Q9UQF0 538 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 BPTFQ12830 3046 aa12.09□□□□□ -0.47
HERC3-207ENST00000452979 EDDM13A0A1B0GTR0 161 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 TLR4O00206 839 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 CBX4O00257 560 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 LATO43561 262 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 TLX3O43711 291 aaPredicted RBP12.08□□□□□ -0.48
HERC3-207ENST00000452979 RNASEH2AO75792 299 aaKnown RBP12.08□□□□□ -0.48
HERC3-207ENST00000452979 LTFP02788 710 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 PTMSP20962 102 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 C5AR1P21730 350 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 TBXAS1P24557 533 aaPredicted RBP12.08□□□□□ -0.48
HERC3-207ENST00000452979 ITPKBP27987 946 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
HERC3-207ENST00000452979 RPL34P49207 117 aaKnown RBP12.08□□□□□ -0.48
HERC3-207ENST00000452979 RPS24P62847 133 aaKnown RBP12.08□□□□□ -0.48
HERC3-207ENST00000452979 TARDBPQ13148 414 aaKnown RBP eCLIP12.08□□□□□ -0.48
HERC3-207ENST00000452979 DNAJC3Q13217 504 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 NNTQ13423 1086 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 CAMK4Q16566 473 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 MS4A13Q5J8X5 152 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 SND1Q7KZF4 910 aaKnown RBP eCLIP12.08□□□□□ -0.48
HERC3-207ENST00000452979 KANSL1Q7Z3B3 1105 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
HERC3-207ENST00000452979 AADATQ8N5Z0 425 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 EID2Q8N6I1 236 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 TFAP2BQ92481 460 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 FAM131CQ96AQ9 280 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 SLC39A13Q96H72 371 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 HSFY1Q96LI6 401 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 SLCO3A1Q9UIG8 710 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 TLR6Q9Y2C9 796 aa12.08□□□□□ -0.48
HERC3-207ENST00000452979 TYW5A2RUC4 315 aaKnown RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 TTC34A8MYJ7 566 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 RNF225M0QZC1 329 aaPredicted RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 ATXN7O15265 892 aaPredicted RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 SLC16A3O15427 465 aaKnown RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 FBXO21O94952 628 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 LUC7L3O95232 432 aaKnown RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 ADH1BP00325 375 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 CTSOP43234 321 aaPredicted RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 ARRB1P49407 418 aaPredicted RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 RGS7P49802 495 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 ADPRHP54922 357 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 NXPH1P58417 271 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 ECT2LQ008S8 904 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 C19orf57Q0VDD7 668 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 STILQ15468 1287 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 COBLL1Q53SF7 1204 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 DCAF6Q58WW2 860 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 PITRM1Q5JRX3 1037 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 MMS22LQ6ZRQ5 1243 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 BEND5Q7L4P6 421 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 ELOA2Q8IYF1 753 aaPredicted RBP12.07□□□□□ -0.48
HERC3-207ENST00000452979 CFAP52Q8N1V2 620 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 CARNMT1Q8N4J0 409 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 OXR1Q8N573 874 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 MFSD2AQ8NA29 543 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 CLEC4CQ8WTT0 213 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 RFFLQ8WZ73 363 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 PTPRN2Q92932 1015 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 SLC35C1Q96A29 364 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 ZSWIM1Q9BR11 485 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 AASDHPPTQ9NRN7 309 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 ARHGAP20Q9P2F6 1191 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 KNTC1P50748 2209 aa12.07□□□□□ -0.48
HERC3-207ENST00000452979 PIK3R2O00459 728 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 PMM2O15305 246 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 RRP8O43159 456 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 MOCS3O95396 460 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 PRCPP42785 496 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 CLDN6P56747 220 aa12.06□□□□□ -0.48
HERC3-207ENST00000452979 FKBP3Q00688 224 aaKnown RBP12.06□□□□□ -0.48
HERC3-207ENST00000452979 BNIP3Q12983 259 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms