RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 ATP1A3P13637 1013 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 XBP1P17861 261 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 CD53P19397 219 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 TUBA4AP68366 448 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 TLE2Q04725 743 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 MAPK7Q13164 816 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 THOC5Q13769 683 aaKnown RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 GXYLT1Q4G148 440 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 CBWD5Q5RIA9 395 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 TMEM63BQ5T3F8 832 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 MTFR2Q6P444 385 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 ZNF66Q6ZN08 573 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 ZNF788Q6ZQV5 615 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 RTL10Q7L3V2 364 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 RD3Q7Z3Z2 195 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 MDGA2Q7Z553 956 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 TMEM200AQ86VY9 491 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 SCN4BQ8IWT1 228 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 OSR1Q8TAX0 266 aaPredicted RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 IP6K1Q92551 441 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 ATP2A3Q93084 1043 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 RRP36Q96EU6 259 aaKnown RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 ADAD1Q96M93 576 aaKnown RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 PPP1R10Q96QC0 940 aaKnown RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 SEC62Q99442 399 aaKnown RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 NPAS1Q99742 590 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 GATA5Q9BWX5 397 aaPredicted RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 TRIM31Q9BZY9 425 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 MROH8Q9H579 483 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 UBN1Q9NPG3 1134 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 PDGFCQ9NRA1 345 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 ARL15Q9NXU5 204 aa4.4□□□□□ -1.71
VPS8-211ENST00000452140 FNDC1Q4ZHG4 1894 aaPredicted RBP4.4□□□□□ -1.71
VPS8-211ENST00000452140 LMTK3Q96Q04 1460 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 SLC22A23A1A5C7 686 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 LINC01548A6NM66 108 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 DHX16O60231 1041 aaKnown RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 WEE2P0C1S8 567 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 PKMP14618 531 aaKnown RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 ARSAP15289 507 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 CD72P21854 359 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 TGM2P21980 687 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 TACR3P29371 465 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 SOX2P48431 317 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 ALKBH1Q13686 389 aaKnown RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 GLE1Q53GS7 698 aaKnown RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 SH2D4BQ5SQS7 431 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 SLC9C2Q5TAH2 1124 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 SLC30A9Q6PML9 568 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 ZNF474Q6S9Z5 364 aaPredicted RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 RBM44Q6ZP01 1051 aaKnown RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 ENDOVQ8N8Q3 282 aaKnown RBP4.39□□□□□ -1.71
VPS8-211ENST00000452140 EXD3Q8N9H8 876 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 NAXEQ8NCW5 288 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 C2CD4CQ8TF44 421 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 MAP4K1Q92918 833 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 RNFT2Q96EX2 444 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 MASTLQ96GX5 879 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 SH2D3AQ9BRG2 576 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 IL21RQ9HBE5 538 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 KLHL13Q9P2N7 655 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 ARHGAP26Q9UNA1 814 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 GDAQ9Y2T3 454 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 PKP3Q9Y446 797 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 AFG3L2Q9Y4W6 797 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 EMSYQ7Z589 1322 aa4.39□□□□□ -1.71
VPS8-211ENST00000452140 TCRBV7S3A2A0A539 114 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 CXorf65A6NEN9 183 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 SAC3D1A6NKF1 404 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 MCIDASD6RGH6 385 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 J3KRW8 73 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 INPPL1O15357 1258 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 TSPAN3O60637 253 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 PLAUP00749 431 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 CYP4B1P13584 511 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 AKR1A1P14550 325 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 TNFAIP3P21580 790 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 MPGP29372 298 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 TYK2P29597 1187 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 HOXA7P31268 230 aaPredicted RBP4.38□□□□□ -1.71
VPS8-211ENST00000452140 GGT5P36269 586 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 MVDP53602 400 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 NR1H2P55055 460 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 ELLP55199 621 aaPredicted RBP4.38□□□□□ -1.71
VPS8-211ENST00000452140 ZBTB16Q05516 673 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 GALNT2Q10471 571 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 TBX2Q13207 712 aaPredicted RBP4.38□□□□□ -1.71
VPS8-211ENST00000452140 GPR162Q16538 588 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 AP5B1Q2VPB7 878 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 UBAP2Q5T6F2 1119 aaKnown RBP4.38□□□□□ -1.71
VPS8-211ENST00000452140 INTS11Q5TA45 600 aaKnown RBP4.38□□□□□ -1.71
VPS8-211ENST00000452140 ANO7Q6IWH7 933 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 ADGRG3Q86Y34 549 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 BRSK2Q8IWQ3 736 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 C8orf58Q8NAV2 365 aa4.38□□□□□ -1.71
VPS8-211ENST00000452140 USP38Q8NB14 1042 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms