RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ABCB4P21439 1286 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 MATKP42679 507 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 ATXN3P54252 364 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 SNX16P57768 344 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 ST8SIA6P61647 398 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 CENPCQ03188 943 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 GRIK2Q13002 908 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 NME3Q13232 169 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 KRT31Q15323 416 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 C9orf64Q5T6V5 341 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 ZNF776Q68DI1 518 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 CXorf57Q6NSI4 855 aaKnown RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 FBXL22Q6P050 247 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 NOP9Q86U38 636 aaKnown RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 CCDC117Q8IWD4 279 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 APCDD1Q8J025 514 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 CCAR2Q8N163 923 aaKnown RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 ZCCHC9Q8N567 271 aaKnown RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 EPS8L1Q8TE68 723 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 NT5C3BQ969T7 300 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 NPY6RQ99463 290 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 STK33Q9BYT3 514 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 GANQ9H2C0 597 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 C6orf106Q9H6K1 298 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-208ENST00000452047 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 PIGVQ9NUD9 493 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 COX16Q9P0S2 106 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 ANGPTL2Q9UKU9 493 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 WASF3Q9UPY6 502 aa12.88□□□□□ -0.35
CPSF4-208ENST00000452047 I6L893 689 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 M0QYT0 321 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 OPHN1O60890 802 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 MOCS3O95396 460 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 LSM8O95777 96 aaKnown RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 DNTTP04053 509 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 SRPRAP08240 638 aaKnown RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 CD59P13987 128 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 MZF1P28698 734 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 SCNN1AP37088 669 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 GGCXP38435 758 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 IRAK1P51617 712 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 PLK1P53350 603 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 ECT2LQ008S8 904 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 MTA1Q13330 715 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 SLC12A1Q13621 1099 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 AUHQ13825 339 aaKnown RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 TTC31Q49AM3 519 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 C5orf22Q49AR2 442 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 RABGAP1LQ5R372 815 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 TAF3Q5VWG9 929 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 DHX40Q8IX18 779 aaKnown RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 HDDC3Q8N4P3 179 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 RNF34Q969K3 372 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 PGAP3Q96FM1 320 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 RPRD1AQ96P16 312 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 GBP4Q96PP9 640 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 BTBD1Q9H0C5 482 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 VPS16Q9H269 839 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 ANLNQ9NQW6 1124 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 RRN3Q9NYV6 651 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 EIF2B4Q9UI10 523 aaKnown RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 SLCO3A1Q9UIG8 710 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 HS3ST4Q9Y661 456 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 CFAP47Q6ZTR5 3102 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 TP53BP1Q12888 1972 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-208ENST00000452047 DOCK4Q8N1I0 1966 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 PLXNA2O75051 1894 aa12.87□□□□□ -0.35
CPSF4-208ENST00000452047 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
CPSF4-208ENST00000452047 TTC34A8MYJ7 566 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 EPHB6O15197 1021 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 BCAT2O15382 392 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-208ENST00000452047 PAGE1O75459 146 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 SEMA4FO95754 770 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 MMEP08473 750 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 PDGFRAP16234 1089 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 CXCR3P49682 368 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 NUMBP49757 651 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 STK19P49842 368 aaPredicted RBP12.86□□□□□ -0.35
CPSF4-208ENST00000452047 KLK7P49862 253 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 JAM2P57087 298 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 NOMO3P69849 1222 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 BNC1Q01954 994 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 CST6Q15828 149 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 TRNP1Q6NT89 227 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 USP30Q70CQ3 517 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 OR52K2Q8NGK3 314 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 C18orf8Q96DM3 657 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 ALG14Q96F25 216 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 RPL10LQ96L21 214 aaKnown RBP12.86□□□□□ -0.35
CPSF4-208ENST00000452047 ZDHHC5Q9C0B5 715 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 MIR1-1HGQ9H1L0 117 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 PDCL3Q9H2J4 239 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms