RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 COPAP53621 1224 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 RNASE9P60153 205 aaKnown RBP8.98□□□□□ -0.97
RFX3-209ENST00000451859 CDK17Q00537 523 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 GFPT1Q06210 699 aaPredicted RBP8.98□□□□□ -0.97
RFX3-209ENST00000451859 NME3Q13232 169 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 ENPP2Q13822 863 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 PTPRNQ16849 979 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 DUOXA1Q1HG43 343 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 PLEKHG6Q3KR16 790 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 PTPN20Q4JDL3 420 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 FSCBQ5H9T9 825 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 MS4A13Q5J8X5 152 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 SH3PXD2AQ5TCZ1 1133 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 TMEM110Q86TL2 294 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 ZCCHC9Q8N567 271 aaKnown RBP8.98□□□□□ -0.97
RFX3-209ENST00000451859 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
RFX3-209ENST00000451859 GPT2Q8TD30 523 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 SLC39A13Q96H72 371 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 CNTNAP3BQ96NU0 1288 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 GBP4Q96PP9 640 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 CNTNAP3Q9BZ76 1288 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 VPS16Q9H269 839 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 LHX5Q9H2C1 402 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 USP36Q9P275 1121 aaKnown RBP8.98□□□□□ -0.97
RFX3-209ENST00000451859 EVLQ9UI08 416 aaPredicted RBP8.98□□□□□ -0.97
RFX3-209ENST00000451859 SLC6A14Q9UN76 642 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 NFE2L3Q9Y4A8 694 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 FRYQ5TBA9 3013 aa8.98□□□□□ -0.97
RFX3-209ENST00000451859 CACNA1BQ00975 2339 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 F5H5T6 163 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 GOLGA8SH3BPF8 625 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 TM4SF5O14894 197 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 HSF2BPO75031 334 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 LUC7L3O95232 432 aaKnown RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 DLDP09622 509 aaKnown RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 PDGFRAP16234 1089 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 ERCC5P28715 1186 aaPredicted RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 DPP6P42658 865 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 CTSOP43234 321 aaPredicted RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 KLK7P49862 253 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 ST8SIA6P61647 398 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 CENPCQ03188 943 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 ZNF252P-AS1Q0IIN9 211 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 KCNMA1Q12791 1236 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 NNTQ13423 1086 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 CAMK2GQ13555 558 aaPredicted RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 E2F5Q15329 346 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 MEA1Q16626 185 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 C2CD6Q53TS8 623 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 TCP11X2Q5H9J9 407 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 SPDYCQ5MJ68 293 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 SYCP2LQ5T4T6 812 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 KLHDC7AQ5VTJ3 777 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 DCAF12L1Q5VU92 463 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 SLC23A3Q6PIS1 610 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 OLFML1Q6UWY5 402 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 C11orf57Q6ZUT1 292 aaPredicted RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 DHX40Q8IX18 779 aaKnown RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.97□□□□□ -0.97
RFX3-209ENST00000451859 ATP6V0D2Q8N8Y2 350 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 DEFB124Q8NES8 71 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 OR2T3Q8NH03 318 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 CEP76Q8TAP6 659 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 GANCQ8TET4 914 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 AZIN2Q96A70 460 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 BTN2A3PQ96KV6 586 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 TMEM245Q9H330 911 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 PRSS16Q9NQE7 514 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 WSB2Q9NYS7 404 aaPredicted RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 INTS6Q9UL03 887 aaKnown RBP8.97□□□□□ -0.97
RFX3-209ENST00000451859 VANGL2Q9ULK5 521 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 PCDHGC3Q9UN70 934 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 PTPRBP23467 1997 aa8.97□□□□□ -0.97
RFX3-209ENST00000451859 ANKRD36A6QL64 1941 aa8.96□□□□□ -0.97
RFX3-209ENST00000451859 CHD5Q8TDI0 1954 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 FAM47DPA6NHR8 397 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 KCNU1A8MYU2 1149 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 J3QL48 77 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 M0QYT0 321 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 SIN3BO75182 1162 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 DAB1O75553 588 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 MOCS3O95396 460 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 IGLV3-25P01717 112 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 DNTTP04053 509 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 SERPINF2P08697 491 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 CYP11B1P15538 503 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 GNSP15586 552 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 ABCB4P21439 1286 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 EEF1GP26641 437 aaKnown RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 CCR1P32246 355 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 ACSL1P33121 698 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 STK19P49842 368 aaPredicted RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 SULT1E1P49888 294 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 IRAK1P51617 712 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 RPS14P62263 151 aaKnown RBP8.96□□□□□ -0.98
RFX3-209ENST00000451859 SLC6A3Q01959 620 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 KRT31Q15323 416 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 PITRM1Q5JRX3 1037 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 EFHC1Q5JVL4 640 aa8.96□□□□□ -0.98
RFX3-209ENST00000451859 WDR45BQ5MNZ6 344 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms